Chroicocephalus ridibundus (black-headed gull): 134524648
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Entry
134524648 CDS
T10910
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134524648 (SMARCE1)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134524648 (SMARCE1)
PBAF complex
134524648 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
134524648
NCBI-ProteinID:
XP_063210911
LinkDB
All DBs
Position
17:complement(3342172..3358276)
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AA seq
412 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFNNELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQNNVAAEEDQAANKTEEKKEEESAPMETEEPHPEESTENQQNGEEG
TSTPEDKESGQEGVDSTAEEGTSDSNTGSESNSATVEEPPADPITEDSEKKE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcttatgccccacctcctaccccagctcctgcaacccaaatgccc
agcacaccagggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcttcctctggtattaccattcca
aagccccccaaacccccagacaagcccctgatgccctacatgaggtacagccggaaggtc
tgggaccaagtgaaggcgtccaatcctgatttgaagttatgggaaattggcaagattatt
ggaggaatgtggcgagatctcactgatgaagagaagcaagagtatttgaatgaatatgaa
gccgaaaagatagagtacaatgagtccatgaaggcctaccataactctcctgcctacctt
gcctacatcaacgcaaaaagtcgtgcggaggctgcgttggaagaagaaagccgacaaagg
cagtcgcgcatggagaaaggtgaaccctacatgagcatacagcccgcggaggatcccgac
gattacgacgatgggttttccatgaagcacacggccacagctcgtttccaaagaaaccat
cgtctcatcagtgagatcctgagtgaaagtgtggtgcccgacgtccgctccgttgtcacc
acagctagaatgcaagttcttaaacgccaggttcaatccttaatggttcatcagcgtaaa
ctagaagctgagcttctgcaaattgaagagcgtcaccaggaaaagaagaggaagtttctg
gaaagcacagaatcctttaacaacgagcttaaaaggttatgcagtttgaaggtggaagtg
gacatggaaaaaattgcagctgagattgctcaggctgaggaacaggctcgcaagaggcag
gaggaacgggaaaaagaagcagcggagcaagccgaacgcagtcagaataacgtagcggct
gaggaagaccaggcagctaacaagacagaggagaagaaagaagaggagagtgctccgatg
gagacagaagagcctcacccggaagagagcacagaaaaccagcagaacggtgaagaagga
acatctaccccagaggacaaggagagtggccaagaaggggtcgacagcactgcagaggag
gggaccagtgacagcaacactgggtcagagagcaatagcgcgacagtggaagagcctccc
gcagaccccatcactgaggatagcgagaagaaagaataa
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