Chroicocephalus ridibundus (black-headed gull): 134524845
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Entry
134524845 CDS
T10910
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04270
Vascular smooth muscle contraction
crid04625
C-type lectin receptor signaling pathway
crid04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134524845 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
134524845 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
134524845 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134524845 (ARHGEF12)
Membrane trafficking [BR:
crid04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134524845 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PDZ_Tricorn
AAA_23
Motif
Other DBs
NCBI-GeneID:
134524845
NCBI-ProteinID:
XP_063211099
LinkDB
All DBs
Position
18:3402030..3482182
Genome browser
AA seq
1545 aa
AA seq
DB search
MSGTQSTITDRFPLKKPTRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDLAAFGHMSPVMTSPHSP
GTSGNAERITSPVLVGEENNIVHNQKVEILRKMLQKEQERLQSLQEEYSRSPTTRLLKEI
QETKKHIPQLQEQLSKATGCAQDGVLSSRSATESLQINEVEAESGDGVSKLDYSGDSPSR
PSSDIADSPRSGLKERIYPDESPEKTEVQDTDSQSSVGSPLSRVGPQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELERRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTKLDAERVRDRNAVEKERACAEQIITKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKVQSIKKEKEGEEKGKRRGFPNIL
GPPRRPSRHDSSAIGRAMEMQKPRHPKHLPTASSVSPEPPDSSKMRQSGSSSDGTDAPYP
PANPMSPLAMGPFSSPEGSKDSETGLKQTGEAPPANDCMDGTPRTPNNTFEFPSPLENLQ
EEEGESERVVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLK
PYEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILNSSDKRKIFSNLEDILGLH
VALNDQMKAVRKRNETSVIGQIGEDLLSWFSGPAEEKLKHATATFCSNQPFALEVIKSRQ
KKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKK
AADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLH
EGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKL
NTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSTRRV
IPLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILSAQSSSPIMSEKS
KVESLLVSERQFDKVQQADLTLKDSSACYEHTTTSLPSVSEGQWALDALRNLGLLKQLLV
QQLGFSEKGTFEGRQRFPRFRTVSQEAQTESGSEPGLQHSDNNKLHQPGTDRTLPRTGTN
ESTASYGLRTSSESPASGDAMQLVMRDPRSSSNLAIDRMSMNLEISTAELEGVGADDSGE
HFFDAREAHSDENPSESELMERKEEEDVQIRISGNYLILDGYGTVQESSTDEEVSSLVLQ
CTAGGRTSLDSAQQQPLSPRDTQSDGGSSPFTEEMMGSRWAGVEESCSFVASPHFSIESR
VQMMQYIQKIEDDLEKLKEVEEDYTILRRQGLAGSASMGEHSDKS
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaacctacaagacac
ggcagcattctgagcagagagtctccagctgacaagaaacagaaggttgaacgctgcagt
agtacgcacgactttgatccgacagatagctcctccaagaagacaaagtctagttcggag
gagagtagatccgagacgtatggtcttgttcaacggtgtgttgttatccaacgggatgag
aacggatttgggctgacagtcagtggagacaatccagtcttcgtgcagtctgtcaaagaa
gatggagcagccatgcgggctggagtgcaaacaggtgatagaattatcaaggtgaatggc
actcttgtaacacattcaaaccatttggaggtggtaaagctgatcaagtcgggttcctat
gtagctctcactgtgcaggggcgcccaccagggtcgccccagattccattagctgattct
gaagtagatctggcagcatttgggcatatgtctcccgtcatgacatctcctcattcacct
ggcacatcaggaaatgcagaaaggataactagcccagtgcttgtcggggaggagaataat
attgtccacaaccagaaggtggagattctgagaaagatgctacagaaggagcaggagcgg
ctgcagtctctgcaagaagagtatagccgatcacccaccacgcgactgctcaaagagata
caggaaacgaagaaacacattcctcagctgcaagagcagttgtccaaagccacaggctgt
gctcaggatggagtcttgtcctccaggtctgcaacggaatcgctgcagatcaatgaagtg
gaggcagagagtggggatggtgtgagcaaactggattacagtggtgacagcccctctcga
ccaagcagtgacattgctgatagtcctcgtagtggcttgaaggagcggatttatccagat
gagagcccggaaaagactgaggttcaggatactgattcgcaatccagtgttggaagtcct
ttatcccgcgtggggcctcagatcattggagcagaggatgatgactttgacactgaacag
gagcagattaatggacagtgcagctgtttccaaaacattgagctcctgaaatctcgccca
gcacacctggctgttcttctgcatcatgtggtgtcccagtttgaccctgcagcattgttg
tgctacctttacacagacttgtacaagcagaccaactccaaagagacgcggcgtgtcttc
cttgagttttaccagttcttcttggaccgagctgcaaatctaaaagttccagttccagat
gaaatctccttagaactagaaagaaggcggccagaactccttcctgaagagcttcatcgc
cagttcatacaaactatgcaagataaagtctgtccagaagttcaaagaaatctggaagac
ttcaggcagaaacgaagtatgggattgacccttgcagaaggagagctaaccaagctggat
gcagaaagagttcgtgaccggaatgcagtggagaaggaaagagcatgtgcagaacagatt
attactaaaattgaggaagtcttgatgacatctcagcctttggaagaagacaagagttcc
acaatgcagtatgtgattcttacttacatgaaacacctgggagtcaaagttaaagaacct
cggaacctggagcagaagcgtggtcgcattggtttcttgccgaagatcaaggtacaaagt
atcaagaaagagaaagaaggagaagaaaaaggaaagagaagaggctttcctaatattctt
ggcccaccaaggagaccgagtcgacatgatagcagtgcaattggcagagccatggaaatg
cagaagccccgacatccaaagcacttacctacagcatcttctgttagcccagagccacca
gattctagcaagatgcgccagagtgggtcctccagtgatggaacagatgcgccataccct
cctgccaacccaatgtctcctttggcaatgggtcccttttcctctccagaaggaagcaaa
gacagtgaaacaggtttgaagcagactggagaagctccacctgctaatgactgtatggat
ggcacaccccgcacacctaataatacctttgaattcccatctcctttggaaaacttgcag
gaggaagaaggagaatcagagagggtggttgacatgggaacaccaaagccttttcgcaaa
atggacagtgttggtttcgcagatgtacaaagtgaggacgagctatatgattttgacatg
gacatggacccccccaactggcaacaacttgtgagccgggaagtgttgatggggctgaaa
ccctatgaaatcaagcgccaagaagtgattaatgaattgttttacactgagagagctcat
gtccgcacgctgaaggttctgcataatgtcttctaccagcgtgtcacccgggaagggatc
ctgaactccagtgacaaacggaaaatcttttccaatctggaggatatccttgggcttcat
gttgcattgaatgatcagatgaaagcagtccgaaaaaggaacgagacttctgttattggc
caaattggggaagacttgctttcctggtttagcggaccagcagaggagaagctgaaacat
gcaactgccactttctgcagtaaccagccctttgctctagaggtcatcaagtcccgccag
aagaaggactctcgcttccagacctttgtgcaggatgctgagagtaatccactgtgtcgc
cggttgcagctgaaggatatcattcccacagagatgcagaggttgactaagtaccccctt
ctgctggataacattgctaagtacacagaactgcctgaagagaaagagaaagtgaagaaa
gcagcagatcattgtcgtcagatccttaaccacgtgaaccaggcagtcaaagagtctgag
aacaagcagcatttggaagactatcagcgtcgtcttgacctgtcctacttgaagcagtct
gaggatcccatgatggatgagttcaggaacttggatctaacaaagagaaaaatgcttcat
gaaggacctctaacttggaaggttaatcgtgacaaaactatcgacctctacactctgctt
ctagaggacattctggtgctgttgcagaaacaagatgataaactggtattgaagtgtcac
agtaaaatcttggcatcgacagctgatagtaaacacaccttcagtcctatcatcaaattg
aacaccgttctggttcgtcaggtggcaacagataacaaagctttcttcgtcatctccatg
tcagaaaatggcgctcatatttatgagctggtggcacagactgtttcagaaaagaatgta
tggcaggaccttatagctcagatggcaggaactgtaaaaatggggagtaccagaagagtg
attccattaccacagtcaggacctggcgaagaagagcgtgaagaagaggagcagcagaag
ctcaaagagcagcatgacattcctgccagtagtctacaaagtccagataaggatttgggc
ctcgagtctcctttaatactgagtgctcagtcttcttcacccatcatgtctgaaaagtcc
aaggtagaaagtcttcttgtgtcagaaagacagtttgataaagtgcagcaggcagacctg
acactgaaagattcttctgcatgctatgaacacacaaccaccagtttgccttccgtatca
gaaggacagtgggcattggatgcattaaggaacttgggcttgctgaaacaattgttggta
cagcaacttggcttttccgagaaggggacctttgaaggccggcagcgctttcctaggttt
agaaccgtttctcaagaagcccaaacagagagtggaagtgagcctggactacagcactct
gacaataacaaacttcaccagcctggaacagacagaacacttccgagaaccggaactaat
gagtccacagctagttatggcctccggacttcatctgaatcgccagcttcaggggatgcc
atgcagctggttatgagagaccccagatcaagtagtaacttagcaatagaccgcatgagt
atgaatctggagatttcaactgcagagctggaaggggtgggtgctgatgatagtggggag
catttttttgacgctcgagaagctcacagtgatgaaaatccatctgaaagtgaactaatg
gaaaggaaggaggaagaggatgtacaaatacggatctcaggaaattatttgatccttgat
ggatatggaacagtgcaggagagctccacagatgaggaggtatcgtctctagttctccag
tgcactgcaggtggccgcacctctttggactctgcacagcagcagccactttccccacgg
gacacccagtcggatggaggaagctccccgtttactgaggagatgatgggctcacgctgg
gcgggagtggaagagtcctgctcatttgtagcaagccctcacttctctatagagtcacgt
gtgcagatgatgcaatatattcagaagatagaggatgaccttgaaaagttaaaggaggtt
gaggaagactacaccattctccgacgccaagggctggctggatcagcctccatgggagag
cactcagacaagagctag
DBGET
integrated database retrieval system
