Chroicocephalus ridibundus (black-headed gull): 134524982
Help
Entry
134524982 CDS
T10910
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134524982 (DSCAML1)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
Other
134524982 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Ig_6
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
134524982
NCBI-ProteinID:
XP_063211412
LinkDB
All DBs
Position
18:complement(1199137..1312806)
Genome browser
AA seq
2042 aa
AA seq
DB search
MWLVTFFLLYSLRKAHAEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIVPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYIIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRTNQYTMSDGTTISHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKSVAVPIPHRASKSDYCNLPLYVKSDAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGTTSTAAA
PAASAVPAPAAAEPPAAAAEARVPTHSKVGGSRDSLLEMSTSGVSRSQKQGAGAYSKSYT
LV
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttttcctgctgtactctttgcggaaagcacacgcagaagatgtt
ggaaccagcctctactttgtgaacgactctatccagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagtgccgtccttcggtggtacctg
gccacaggcgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcagctggcaaaatcaggagcccaaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagacaccgtttctatcgtcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggagccaggctctcggtctcagaccca
gcggagtccatccccacgatgctagacagcttccagtccagggaggtgaaggctggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtccggtggatcaag
gacgggcgcccgctccccgccgacagccgctggagcaagcgcatcacgggcctgaccatc
agcgacctgcgcgtggaggacagcgggacctacatctgcgaggtgaccaacaccttcggg
tctgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaagacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacatcatccgctggtaccgcaacacggacctggtggtggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcgcagaagagccactcc
ggggcctaccagtgctttgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggcccccccgccaaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgcaccaaccagtacaccatg
tcggacggcaccaccatcagccacatgaacgtgacgagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgagcgatgaagaacataacagccgtagcgggtagggac
actttcatcaactgcagggtgatcgggtacccatattactccatcaagtggtacaaggac
tctttgctgctgcccgataaccaccgccaagtggtctttgagaacgggactcttaagctg
atggacgtccagaaaggcatggatgaaggagaatatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcacggtgaaagtccctccgctgatccagccc
ttcgagttcccgccagcctccatcgggcagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctccggctct
ggggtcaccattgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgctgccacggtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggtaaagccggggtgctgaactgctccgttgatgggtacccgcctccgaaagtc
atgtggaaacacgccaaaggaagcggcaacccccagcagtaccaccccatacccctcacg
ggccgcatccagatcctgcccaacagctccctcctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggggtgggcaccgacatcagcaagtccatg
tttctcaccgtgaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aaggggcagaccaaggagctgaactgcaccgctcggggcgagcggcccatcatcatccgc
tgggagaagggcgacaccgtcatcgatcccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgcggggac
tcggtcttcttctcctgtcacgccatcaactcttacggcgaggacagaggcttgatccag
ctcaccgtccaagagcccccggacccgccggagctggagatccgcgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggtttgacggcaacagcatcatcacggggttcgat
atcgagtacaagaacaagtcggattcctgggatttcaagcagtccacgcgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctccacccagcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacg
gaggaagcagctcccgacgggcctccgatggatgtcaccttgcagcccatgacgtcccag
agcatccaggtcacctggaaggcccccaagaaggagttgcagaatggggtgatccgtggc
taccagatcgggtaccgggagaacagccctggcagcaacgggcagtacagcatcgtggag
atgaaagccacgggagacagcgaggtctacacgctggacaacctgaagaagtttgcccag
tacggggtggtggtgcaggcgttcaaccgcgcggggacgggaccgtcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaatgtgcgggccatctcc
atcacgtcagacgtggccgtgatctcctggtcagagcccccgcgcagcaccctcaatggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggggagtggggtgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacccaggccggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtccccccgctggcatcaaggctgtccca
tcttccgccagcagcgtggtggtgtcctggttgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggcccccagcgagtac
gagaccagccccgaccagctcttctaccgcatcgcccacctgaaccgcgggcagcagtac
atgctgtgggtggctgccgtcacctccgccggccgcggcaacatcagcgagaaagtcacc
atcgagcctgctgggaaagcccctgccaagatcatctctttcggaggcaccgtcaccacc
ccgtggatgaaggacgtgaggctgccgtgcaactccgttggggagccggtccccgccatc
aagtggaccaaggacagtgaggactccgccatccccgtcacggtggacggccatcgcctg
atccaggccaacggcacgctggtgctgcgctcggtgaaggcagaggactctggctactac
acctgcactgccaccaacacctggggcttcgacactatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgactgtctccaagacctcggcgtcatccatcacgctg
gcctggattcccggggacaacgggggcagctccatccggggcttcgtgcttcagtactcg
gtggacaacagtgaggagtggaaggacgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtg
ggggctggccgcatcagcgagatcattgaagccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcactgccatcgtcctggagtaccggcccaagggc
aactgggtctggcagagcctccgcaccaacagctccagcgaggtcttcctgacggagctg
cgcgaggctacgtggtacgagctccgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatcccccctatcaagtct
gcccaaggggagggcgacgacgtgaagaagcttttcaccatcgcctgccccgtgatcttg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcaaagagtttggctgagatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaagggccccccgcaaggcccccgactgcacatcgacatccctcgg
gtacagctcctgatcgaggacaaggaaggcatcaagcagctgggggatgacaaagccacg
atcccggtgacggacacggagttcagtcaggcggtgaacccccagagcttctgcacaggc
gtctcgctgcaccaccccgctctgatccagaacacggggcccctcatcgacatgtcggac
atccgccccggcaccaaccctgtgtcaaggaagagtgtgaagtctgcacacagcacccgc
aaccgctactccagccagtggaccctcaccaagtgccaggcgtccaccccggcacggacc
ctcacctctgactggaggacggtgggctcccagcatggcatcacggtcacggagagtgac
agctacagcgccagcctctcccaggacacagacaaggggcggaacagcatggtgtcaaca
gagagtgcctcctctacctatgaggagctggcacgtgcctacgagcacgcgaagctggag
gagcagctgcaacatgccaagtttgagatcacggagtgcttcatctctgacagctcctca
gaccagatgaccaccggcaccaccgacaatgctgacagcatgacctccatgagcaccccc
tcagagcccggcatctgtcgcttcacagcttccccccccaaaccccaggacagcgagcgg
ggcaagagtgtggccgtacccatcccacaccgtgccagcaagagtgactactgcaacctc
ccgctctacgtcaagtcggacgccttcttccgcaagcccgacgcccacgagccctgcccc
gtggtgcccccccgggaagcctccatccgcaacctggcccgggcgtaccacgcgcaagcc
cggcacatgacgctggagcccggcgccaagcccctggggctgcctcccccagcctccgcc
gcaaccaccttacctcaaaggactctccccatgcccggcaccaccagcaccgccgccgcg
cccgccgccagcgccgtcccggcacccgctgctgccgagccccccgccgccgccgccgag
gcgcgggtgcccacgcactccaaagtgggaggctccagggactcactcctagaaatgagc
acatcgggtgtaagcaggtctcaaaaacagggggccggagcctactccaagtcctacacg
ctggtgtag
DBGET
integrated database retrieval system
