KEGG   Chroicocephalus ridibundus (black-headed gull): 134524982
Entry
134524982         CDS       T10910                                 
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
  KO
K06768  Down syndrome cell adhesion molecule-like protein 1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:crid04515]
    134524982 (DSCAML1)
Cell adhesion molecules [BR:crid04515]
 Immunoglobulin superfamily
  Other
   134524982 (DSCAML1)
SSDB
Motif
Pfam: I-set Ig_3 fn3 Ig_2 ig Ig_DSCAM-DSCAML_C V-set C2-set_2 Pur_ac_phosph_N C1-set V-set_CD47 Ig_6 Receptor_2B4 Interfer-bind fn3_2 ChitinaseA_N
Other DBs
NCBI-GeneID: 134524982
NCBI-ProteinID: XP_063211412
LinkDB
Position
18:complement(1199137..1312806)
AA seq 2042 aa
MWLVTFFLLYSLRKAHAEDVGTSLYFVNDSIQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIVPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYIIRWYRNTDLVVVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRTNQYTMSDGTTISHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPMTSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
MLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKSVAVPIPHRASKSDYCNLPLYVKSDAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGTTSTAAA
PAASAVPAPAAAEPPAAAAEARVPTHSKVGGSRDSLLEMSTSGVSRSQKQGAGAYSKSYT
LV
NT seq 6129 nt   +upstreamnt  +downstreamnt
atgtggctggtaacttttttcctgctgtactctttgcggaaagcacacgcagaagatgtt
ggaaccagcctctactttgtgaacgactctatccagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagtgccgtccttcggtggtacctg
gccacaggcgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcagctggcaaaatcaggagcccaaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagtgttgtgtcctgg
gagaaagacaccgtttctatcgtcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggagccaggctctcggtctcagaccca
gcggagtccatccccacgatgctagacagcttccagtccagggaggtgaaggctggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtccggtggatcaag
gacgggcgcccgctccccgccgacagccgctggagcaagcgcatcacgggcctgaccatc
agcgacctgcgcgtggaggacagcgggacctacatctgcgaggtgaccaacaccttcggg
tctgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaagacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacatcatccgctggtaccgcaacacggacctggtggtggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcgcagaagagccactcc
ggggcctaccagtgctttgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggcccccccgccaaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgcaccaaccagtacaccatg
tcggacggcaccaccatcagccacatgaacgtgacgagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgagcgatgaagaacataacagccgtagcgggtagggac
actttcatcaactgcagggtgatcgggtacccatattactccatcaagtggtacaaggac
tctttgctgctgcccgataaccaccgccaagtggtctttgagaacgggactcttaagctg
atggacgtccagaaaggcatggatgaaggagaatatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcacggtgaaagtccctccgctgatccagccc
ttcgagttcccgccagcctccatcgggcagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctccggctct
ggggtcaccattgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacggcaactacacctgcatcgccagcaacgacgctgccacggtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggtaaagccggggtgctgaactgctccgttgatgggtacccgcctccgaaagtc
atgtggaaacacgccaaaggaagcggcaacccccagcagtaccaccccatacccctcacg
ggccgcatccagatcctgcccaacagctccctcctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggggtgggcaccgacatcagcaagtccatg
tttctcaccgtgaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aaggggcagaccaaggagctgaactgcaccgctcggggcgagcggcccatcatcatccgc
tgggagaagggcgacaccgtcatcgatcccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgcggggac
tcggtcttcttctcctgtcacgccatcaactcttacggcgaggacagaggcttgatccag
ctcaccgtccaagagcccccggacccgccggagctggagatccgcgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggtttgacggcaacagcatcatcacggggttcgat
atcgagtacaagaacaagtcggattcctgggatttcaagcagtccacgcgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctccacccagcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacg
gaggaagcagctcccgacgggcctccgatggatgtcaccttgcagcccatgacgtcccag
agcatccaggtcacctggaaggcccccaagaaggagttgcagaatggggtgatccgtggc
taccagatcgggtaccgggagaacagccctggcagcaacgggcagtacagcatcgtggag
atgaaagccacgggagacagcgaggtctacacgctggacaacctgaagaagtttgcccag
tacggggtggtggtgcaggcgttcaaccgcgcggggacgggaccgtcgtccagcgagatc
aacgccaccacgctggaggacgttcccagccagccccccgagaatgtgcgggccatctcc
atcacgtcagacgtggccgtgatctcctggtcagagcccccgcgcagcaccctcaatggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggggagtggggtgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaagttcacc
aactacagcgtgcaggtgctggcgtacacccaggccggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtccccccgctggcatcaaggctgtccca
tcttccgccagcagcgtggtggtgtcctggttgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggcccccagcgagtac
gagaccagccccgaccagctcttctaccgcatcgcccacctgaaccgcgggcagcagtac
atgctgtgggtggctgccgtcacctccgccggccgcggcaacatcagcgagaaagtcacc
atcgagcctgctgggaaagcccctgccaagatcatctctttcggaggcaccgtcaccacc
ccgtggatgaaggacgtgaggctgccgtgcaactccgttggggagccggtccccgccatc
aagtggaccaaggacagtgaggactccgccatccccgtcacggtggacggccatcgcctg
atccaggccaacggcacgctggtgctgcgctcggtgaaggcagaggactctggctactac
acctgcactgccaccaacacctggggcttcgacactatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgactgtctccaagacctcggcgtcatccatcacgctg
gcctggattcccggggacaacgggggcagctccatccggggcttcgtgcttcagtactcg
gtggacaacagtgaggagtggaaggacgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtg
ggggctggccgcatcagcgagatcattgaagccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcactgccatcgtcctggagtaccggcccaagggc
aactgggtctggcagagcctccgcaccaacagctccagcgaggtcttcctgacggagctg
cgcgaggctacgtggtacgagctccgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatcccccctatcaagtct
gcccaaggggagggcgacgacgtgaagaagcttttcaccatcgcctgccccgtgatcttg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcaaagagtttggctgagatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaagggccccccgcaaggcccccgactgcacatcgacatccctcgg
gtacagctcctgatcgaggacaaggaaggcatcaagcagctgggggatgacaaagccacg
atcccggtgacggacacggagttcagtcaggcggtgaacccccagagcttctgcacaggc
gtctcgctgcaccaccccgctctgatccagaacacggggcccctcatcgacatgtcggac
atccgccccggcaccaaccctgtgtcaaggaagagtgtgaagtctgcacacagcacccgc
aaccgctactccagccagtggaccctcaccaagtgccaggcgtccaccccggcacggacc
ctcacctctgactggaggacggtgggctcccagcatggcatcacggtcacggagagtgac
agctacagcgccagcctctcccaggacacagacaaggggcggaacagcatggtgtcaaca
gagagtgcctcctctacctatgaggagctggcacgtgcctacgagcacgcgaagctggag
gagcagctgcaacatgccaagtttgagatcacggagtgcttcatctctgacagctcctca
gaccagatgaccaccggcaccaccgacaatgctgacagcatgacctccatgagcaccccc
tcagagcccggcatctgtcgcttcacagcttccccccccaaaccccaggacagcgagcgg
ggcaagagtgtggccgtacccatcccacaccgtgccagcaagagtgactactgcaacctc
ccgctctacgtcaagtcggacgccttcttccgcaagcccgacgcccacgagccctgcccc
gtggtgcccccccgggaagcctccatccgcaacctggcccgggcgtaccacgcgcaagcc
cggcacatgacgctggagcccggcgccaagcccctggggctgcctcccccagcctccgcc
gcaaccaccttacctcaaaggactctccccatgcccggcaccaccagcaccgccgccgcg
cccgccgccagcgccgtcccggcacccgctgctgccgagccccccgccgccgccgccgag
gcgcgggtgcccacgcactccaaagtgggaggctccagggactcactcctagaaatgagc
acatcgggtgtaagcaggtctcaaaaacagggggccggagcctactccaagtcctacacg
ctggtgtag

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