Chroicocephalus ridibundus (black-headed gull): 134525000
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Entry
134525000 CDS
T10910
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
crid04514
Cell adhesion molecule (CAM) interaction
crid04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
134525000 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134525000 (NCAM1)
04517 IgSF CAM signaling
134525000 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134525000 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134525000 (NCAM1)
04090 CD molecules [BR:
crid04090
]
134525000 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
crid00536
]
134525000 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crid00537
]
134525000 (NCAM1)
04091 Lectins [BR:
crid04091
]
134525000 (NCAM1)
Membrane trafficking [BR:
crid04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
134525000 (NCAM1)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
NCAM1/2
134525000 (NCAM1)
CD molecules [BR:
crid04090
]
Proteins
134525000 (NCAM1)
Glycosaminoglycan binding proteins [BR:
crid00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
134525000 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
crid00537
]
Others
134525000 (NCAM1)
Lectins [BR:
crid04091
]
I-type lectins (Siglecs)
134525000 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
FN3_DSCAM-DSCAML_C
C2-set_2
C1-set
C2-set_3
Izumo-Ig
V-set_CD47
Ig_PDGFR_d4
Adeno_E3_CR1
Pur_ac_phosph_N
Muramidase
Collagen_bind_2
Motif
Other DBs
NCBI-GeneID:
134525000
NCBI-ProteinID:
XP_063211457
LinkDB
All DBs
Position
18:complement(1733656..1880361)
Genome browser
AA seq
1124 aa
AA seq
DB search
MLLATVLPWTLFLLGAAASLQVDIVPSQGEISVGESKFFLCQVAGEAKYKDISWFSPNGE
KLTPNQQRISVVRNDDYSSTLTIYNANIDDAGIYKCVVSSVEEGDSEATVNVKIFQKLMF
KNAPTPQEFKEGDDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK
KTDEGTYRCEGRILARGEINFKDIQVIVNVPPSVRARQTTMNATANLSQSVTLACDADGF
PEPTVTWTKDGEPVEQGDDEEKYSFNYDGSELIIKKVDKSDEAEYICIAENKAGEQDATI
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPE
KQETLDGRIIVRSHARVSSLTLKEIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPI
LKYKAEWRALGEGEWHSRLYDAKEANVEGVITITGLKPETTYSVRLSAVNGKGVGEISLP
SDFKTQPVRIPHSREPSAPKLEGQMGEDGNSIKVNVIKQDDGGSPIRHYLIKYKAKHSSE
WKPEIRLPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSP
TSGLGTAAIVGILIVIFVLLLVAVDVTCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEG
KAAFSKDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTAATVEDMLPSV
TTGTTNSDTITETFATAQNSPTSETTTLTSSIALPATAIPDSNSMSPGQATPAKGAATSV
SSPPPSSTPKVAPLVDLSDTPSSTPATNNLSSSVLSNQGAVLSPSAVATVAETSKAAAGN
KPAAPSPANLTSPPAPSEPKQEASSIKSTEKEAMQPSTVKSPTETTKNPNNLKSEAASGS
TTNPSQTEDFKMDEGTFKTPDIDLAKDVFAALGTTTPASVTSGQARELASSPADSSVPAA
PAKTEKIPVEDKPEVQATETKTPPAEVKTVPNEATQTNENESKA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgctgctagccactgtgctgccctggacattgtttttgcttggagccgcagcctctcta
caagtggacattgttccaagccagggggagatcagtgtcggagaatccaagttcttctta
tgccaagtggcaggggaggccaaatacaaagacatttcctggttttcccctaatggtgag
aagctgacgccgaaccaacagcgcatctcagtggtgcgaaatgatgactactcctccacc
ctcaccatctacaacgccaacattgatgatgctggcatctataaatgtgttgtcagtagc
gtggaggagggagactctgaggccaccgtcaatgtgaaaattttccaaaagctgatgttc
aagaatgctcccactcctcaggaattcaaggaaggggatgatgctgtgattgtgtgtgat
gtggtcagctcactgcctcctaccatcatctggaagcacaaaggcagggatgttatccta
aaaaaagatgttcgatttatagtcctgtccaacaactacctgcagatccggggaatcaag
aaaacagatgaagggacataccgctgtgagggacgaatcttggctcgtggggagataaac
ttcaaagatattcaggtcatcgtaaatgtacctccttctgtgcgcgccaggcagaccact
atgaatgccactgccaacctcagccagtctgtcaccttagcatgtgatgctgatggcttt
cctgagccaactgtgacgtggacaaaggacggagagccagtagaacagggcgatgatgaa
gagaaatacagttttaactacgatgggtctgagctcatcatcaagaaggtggataagagt
gatgaagcagaatacatctgcatcgctgagaacaaggctggagagcaggatgccaccatt
catctcaaagtctttgcaaaacccaaaatcacctatgtggagaataaaacagccatggag
ctggaggatcagattacacttacctgtgaggcctctggggacccaatcccttccatcact
tggagaacttccacccggaacatcagcaatgaagagaaggcttcgtggacccggcccgag
aaacaagagaccctggatggacgcatcatagtacgtagccatgcccgggtgtcgtccttg
actctcaaagaaattcagtacacagatgctggagaatatgtatgcacagccagcaacacc
atcgggcaggactcccaagccatgtaccttgaagtgcagtatgcccccaagcttcagggc
cctgtggctgtctatacctgggaagggaatcaagtgaacatcacctgtgaggtatttgct
taccccagtgctgtcatatcctggttccgggatggacagctgcttcccagctcaaactac
agcaatatcaagatctacaacactccatcagcaagctacctggaggtgacaccggactct
gaaaatgactttgggaactataactgcactgctgtgaaccgcattggccaagagtcctca
gagttcattcttgtgcaggcagatactccatcctctccttccattgacagagtggagccc
tattccagtactgcccaggtggagtttgatgagcctgaagctactggaggggtgcccatc
ctcaagtacaaagcagagtggagagcactgggtgagggagaatggcattcgaggctgtat
gatgcaaaagaagcaaatgtggagggtgtgatcactatcactggcctgaaacctgaaaca
acctactccgtgagactgtctgcggtcaatggcaagggtgtgggtgagattagcctacca
tctgacttcaagacacaaccagttcgcatccctcactcacgggaacccagcgcacccaaa
ctggaaggccagatgggagaagatggtaactccattaaagtgaacgttatcaaacaggat
gatggtggctccccaattagacattatctgatcaaatacaaagctaagcattcctcagaa
tggaaaccagagatcagacttccatctggcagtgaccacgtcatgctcaagtccctggac
tggaatgcagagtatgaggtttatgtgatagctgaaaaccagcaagggaagtccaagcca
gctcactatgctttccgaacttctgctcagcctactgtcatcccagccagcactagccct
acatcaggccttgggactgctgccattgtaggcattctcattgttatctttgtgctgctc
ctggtggctgtggatgtcacctgctacttcctgaacaagtgtggcctgctgatgtgcatt
gctgtcaacttatgtggcaaatccggcccaggagccaagggcaaagacatggaggagggc
aaagccgccttctcgaaagatgagtccaaggagcctattgtggaggtgcggactgaagag
gagcggacccccaaccacgatgggggaaaacacacagagcccaatgagaccaccccactg
acggagccagagcaccctgctgataccgcagctactgttgaggacatgctgccttctgta
actacgggcaccactaactctgacactatcactgaaacctttgccactgctcagaacagc
cccaccagcgagaccactacgctgacctccagtattgccctgccagccacggccattcct
gactcaaactccatgtcgcctggccaggctactccagccaaaggggcagccacctcagtc
tcttcaccaccaccctcctccactcccaaagtggccccccttgttgatctcagcgatacc
ccaagctctactccagctactaataatttgtcctcaagtgttctgtccaaccaaggtgca
gtgctcagccccagcgctgttgctaccgtggctgagacctccaaagcggcagctggtaac
aagccagctgccccaagccctgcaaacctcactagccctccagctccatcagagcccaag
caggaggcctcaagcatcaagagcactgaaaaggaagccatgcagcccagtacagtgaag
agcccaacagagacaaccaagaacccaaacaatctgaagagtgaggctgcttcaggcagc
actacgaacccctcacagactgaggactttaaaatggacgaagggaccttcaagacacca
gacattgatcttgcaaaggatgtttttgcagctcttggcactactactcctgccagtgtg
actagtgggcaagctcgtgagcttgcttcttcccctgcagacagctctgtacctgctgca
cctgcaaagaccgagaaaatcccagtagaggacaaacctgaagtgcaagcaacggaaact
aagacacctccggcagaagtcaagacggtccctaatgaagccacacaaacaaatgaaaac
gagagcaaagcatga
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