Chroicocephalus ridibundus (black-headed gull): 134525012
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Entry
134525012 CDS
T10910
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134525012 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134525012 (CADM1)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
Nectin family
134525012 (CADM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
C1-set
Mucin
MUCL1
Motif
Other DBs
NCBI-GeneID:
134525012
NCBI-ProteinID:
XP_063211483
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Position
18:complement(557843..708791)
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AA seq
487 aa
AA seq
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MAGRAQPSGPAGSGGARGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCRV
KNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQL
YTDPPQEIYTTITVLVPPRNLVIDIQKEIAVEGEEIELNCTAMASRPATTIRWFKGNKEL
TGKSEVEQWSDMYTVTSQLVLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRV
SQNYPVQGLTREGEPLELTCAAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTD
NGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHG
FTQLPNSAEELDYGDLSGTPVPLNASPEALPTVQLSNASLAFRPDSRAGEEGAIRSVDHA
VVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSE
EKKEYFI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcccagcggccccgcgggcagcggcggcgcccgcggcctcctc
ccgctcctcctgctgctgctctccgccgccgccatcatccccagaggcgacggccagaat
ctggttactgaagacgtgacggtggtggagggagacgtcgccaccatcagctgccgcgtc
aagaacagcgacgactcggtgattcagctcctgaaccccaacaggcaaacgatttatttc
cgcgatttcaggccgctgaaggacagcaggttccagctggtgaacttctccaacagcgag
ctccgcgtctctttgacgaacgtctccatttctgatgagggaaggtacttctgccagctc
tacactgatcccccccaggaaatttataccaccattacagtgctcgtcccgccacgcaat
ttggtaattgatatccagaaagaaatcgccgtcgagggagaagagattgagctgaactgc
actgccatggccagcagaccagccaccaccatccgatggttcaaaggaaacaaggagcta
accggcaagtcggaggtggagcagtggtccgacatgtacacggtgaccagccagctggtg
ctgaaggtgggacgggaggacgacggcgtccctgtcatctgcctggtggatcaccctgcc
gtcaaagacttgcagacgcagcgttacctagaagtcatgtataagcctcaagtgcgggtc
tctcagaattacccggtgcaaggcctcacgagagaaggggagccgctggagctgacctgc
gcagcctttggaaagccacagcctacggacatgaggtggttaagagtagatgatgagatg
cctcaacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaacagat
aatggtacataccgctgtgaggcttcaaacgcggtggggaaatcacatgcggattacatg
ctgtttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccactacc
accaccatccctaccaccatcacagacacaacggcgacgacagaaccggcagttcacggc
tttactcagttgcccaattcggcagaggagctggactatggggatctctcaggtactcct
gtcccgctaaacgcgtcgccggaggctctgccaactgtgcaattaagtaatgcatccctt
gccttccgcccagattctcgtgcaggtgaggaaggggccattcggagcgtggaccatgcg
gtggttggtggcgtcgtggccgtggtcgtgtttgcgatgctttgcctgctcatcatttta
gggcgatattttgccagacataaaggtacgtacttcactcacgaagccaaaggagcagac
gatgcggccgacgcagacacagccatcatcaacgcagagggaggacagaacaactccgaa
gaaaagaaagagtacttcatctag
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