Chroicocephalus ridibundus (black-headed gull): 134525670
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Entry
134525670 CDS
T10910
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134525670 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134525670 (NFASC)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
L1 family
134525670 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_VEGFR-1-like_5th
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
134525670
NCBI-ProteinID:
XP_063212804
LinkDB
All DBs
Position
20:4727952..4828448
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AA seq
1359 aa
AA seq
DB search
MVMQRHHLTRAGIALALCLHHLVSAIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPH
NETSLRNHTDMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGSMPRLHCRIKHDPTLKLTVTWLKDDAPLYMGNRMKKEDDGLTIYGV
AEKDQGDYTCVASTELDKDSAKAYLTVLAVPANRLRDLPKERPDRPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRFQPGMWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSLPSVPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVKAPRHVVWNTPIYVPYEIKVQAENDFGRAPEPDTVIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNL
ESINLEWDHPEHPNGVLTGYNLRYQAFNGTKTGRTLVENFSPNQTRFTLQRTDPISRYRF
FLRARTQVGEGEAIVEESPALLNEATPTPAATGLPPTTIGLTSTTTTTPTTTTTDTTTTT
TDTTTTDTTTTTTTTAATTLPATTVASATAATERAPAATTKQELATNGSFIWDIRAMANS
NWANITWSHNYSAGTDFVVKYITSNKTEKSIPVKAQTPSSVQLANLTPGMMYKLWVFPIW
SSPSEHSYITFTTSSAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPV
RDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQ
FNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgcaaagacaccacctcacccgcgcaggaatagcgttggccctctgccttcat
cacctcgtcagcgccatcgaagtccctctggattcaaatattcagagtgaattgcctcag
ccccccacaatcaccaagcagtccgtgaaggactacatcgtggacccaagagataatatc
ttcattgaatgtgaagccaaagggaaccccgttcccactttttcctggacacggaacggg
aagttcttcaacgtggcgaaggaccccaaggtgtccatgcggcggcggtcggggacgctg
gtcatcgacttccacagcggggggcggccggaggactacgagggcgagtaccagtgtttc
gcccggaacgactacggcactgctctctccagcaaaatccacctccaggtctctaagtct
cccctgtggcccaaggagaaggtggatgtgatagaggtggatgaaggtgctccgctcagc
ctgcagtgcaacccgccgccgggcctaccttctcccgtcatcttctggatgagcagctcc
atggagcccatccaccaggacaagcgcgtctcccagggccagaacggcgacctgtacttc
tccaacgtcatgctgcaggatgcccagaccgactacagctgcaacgcgcgcttccacttc
acccacaccattcagcagaaaaacccctacaccctcaaggtgaaaaccaagaaaccccat
aacgaaacgtctttacgaaatcacactgacatgtacagtgcccgagggattacggaaaca
actcccagcttcatgtatccctacgggacctcgagcagtcagatggtgctgagaggggtg
gacctcctgctggagtgcattgcttcaggagtaccagcaccagacatcatgtggtacaag
aaaggaggcgagctcccagcaggcaaaaccaagctggaaaactttaacaaggctcttcgt
atctccaacgtctccgaggaagactccggggagtatttctgcttggcgtcaaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccatactggctggacgaa
ccccaaaacctcatcctggcccccggcgaggacggccggctggtgtgtcgagccaacggg
aaccccaagcctgcgatccagtggctggtgaacggcgagcctatagaagcttctcccccc
aacccgagccgagaggtggctggagacaccattgtatttcgagacacccagatcggcagc
agtgctgtgtaccaatgcaatgcatccaacgagcacggctaccttctcgccaacgccttt
gtcagcgtcctggacgtgcctccacggatactggccccccgcaaccagctcatcagggtg
attcaaaacaacaggacccgactcgactgccccttctttggctcgccgatccccaccttg
agatggtttaagaacggccaggggaacacactggatggaggaaactacaaggcacatgag
aacggaagcttggagatgaacatggctcggaaggaggaccagggcatctacacttgtgtg
gctaccaacatcctggggaaggcagaggcccaggttcgcctggaggtcaaagacccaaca
aggatcgtgaggggaccagaagatcaggtggtgaagaggggctccatgcctcgcctccac
tgccgcataaagcacgacccgacgctgaaactcaccgtcacttggctgaaagacgatgca
cccctgtacatgggaaacaggatgaagaaggaagatgacggtctgacaatatatggcgtg
gctgagaaggaccaaggggactacacctgcgtggctagcacggagctggacaaggactcg
gctaaagcgtacctcaccgtactagctgtccctgctaaccgtttgagagacttacctaaa
gaacgacccgaccggccccgtgacttggagctgacagacctggccgagaggagcgtgcgg
ctgacgtggatccccggcgatgacaataacagccccatcacagactacatcgtccagttt
gaggaggaccggttccaacctggcatgtggcacaaccactccaggtaccccgggagcgtc
aactcggccgtcctgagcctctctccttacgtcaactaccagtttcgggtgatcgcggtg
aatgatgtgggcagcagcctgcccagcgtgccctccgaacgctaccagaccaacggggca
cgtcctgaaattaatccaacaggagttcaaggtgcagggacccaaaaaaacaacatggag
atcacctggacgcctctgaatgcaactcaagcttatgggcccaacctcaggtacattgtg
agatggaggcggagggacccccgagggagctggtacaacgagacagtgaaggcaccgagg
cacgtcgtctggaacacacccatctacgttccctacgagatcaaagtgcaggcagagaat
gactttggtagagcaccggagcctgacaccgtcatcggctattcgggggaagattatccc
aaggctgcgcctacggatgttaggataagagttttaaacagcactgccattgctctgacc
tggacccgagtgcacctggacaccatccagggacagctcaaggagtacagagcctatttc
tggagagacagtagtttgctgaagaacctgtgggtctccaaaaaacggcagtatgtgagt
tttcctggagaccgaaaccggggcatagtgtcccggctgtttccttacagcaactacaag
cttgagatggttgtaaccaacgggcgaggagacgggccgcgcagtgaagttaaggagttc
cccacacccgaaggagtgcccagctcccccaggtatttaagaatccgacagccaaatctg
gaaagcatcaatctggagtgggatcacccagagcatcccaacggagtcctcacaggatac
aaccttagatatcaagcctttaatggaaccaaaacgggccgaaccctggtagagaacttc
tctcccaaccagacaaggttcaccctgcagcggacagaccccatctcgcgctatcgcttc
ttcctgcgcgcacggacccaggtgggagaaggagaagccatagtggaggagtcgccagct
ttgctgaacgaagccacgccaaccccagctgcaactgggctgcctccaactacaatcggt
ctaaccagtactactacaacaaccccaactaccaccaccaccgacacaactaccacaact
accgacacaactaccaccgacacaactaccaccaccaccaccacagccgccaccactcta
cccgccaccaccgtcgcaagcgctacggcagctacggagagggctccggcagccaccaca
aagcaggagttggccaccaatggatcgttcatatgggacataagagctatggctaatagt
aactgggcaaacatcacctggagccacaattactctgcaggaactgactttgtggttaag
tatatcaccagtaacaagacagagaaatctatccctgttaaagctcagaccccttcctct
gtgcagctggcgaatctgacgccgggaatgatgtacaagctgtgggtgttccccatatgg
tctagccccagcgaacactcgtacataacctttaccaccagctcagcttataccaagaat
cacgtggacatcgcgacgcagggctggttcatcgggctgatgtgtgccatagctctcctg
gttctcatcctcctgatagtctgcttcattaagaggagccgaggcgggaaatatccagta
cgagacaataaagacgagcatctcaatcccgaagacaagaacgtagaagacggctcgttc
gactacagcgatgaagacaacaaacccctgccaaacagccagacctccctggacggcacg
ataaagcagcaggagagtgacgatagcttggtggactatggagaggggggagaagggcag
tttaatgaggacggctcctttatcggccagtacacggtgaagaaggacaaagaggagacc
gaaggcaacgagagctcggaagccacctccccagtcaatgctatctactccttggcatag
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integrated database retrieval system
