Chroicocephalus ridibundus (black-headed gull): 134525672
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Entry
134525672 CDS
T10910
Symbol
SORT1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
134525672 (SORT1)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Mo-co_dimer
Motif
Other DBs
NCBI-GeneID:
134525672
NCBI-ProteinID:
XP_063212829
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Position
20:complement(1870704..1883248)
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AA seq
793 aa
AA seq
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MGPRGAARLAAGLTLALGAAVALGLRHRHRDPRGGGMAAAVAAGGEACGGLRGVPAALGN
NTHQCVFDDLSGSVSLSWVGDSTGVILVLTTFQVPLVIMSFGQSKLYRSEDYGKTFKDIT
GLINNTFIRTEFGMAIGPENSGKVILTGDVSGGSRGGRIFRSSDFAKNFIQTDLPFHPLV
QISYHPQKSHCLLALSTENGLWVSKDFGETWEEIHKAVCLAKWGANDTIFFTTYLNNSCK
ADLGLLELKKTSDFGKAFKVIGTKIYSFGLGGRFLFASVMTEKGTTRRIHVSLDQGETWN
MAQLPSVGHEQFYSILAANDDLVFMHVDEPGDTGFGTIYTSDDRGIVYSKSLERHLYTTT
GGETDFTNVTSLRGIYITSVLSEDNSIQSVITFDRGGEWVPLRKPKNTTCDSTARSKEEC
SLHIHASYSISQKLNVPMAPLSEPNAVGIVIAHGSVGGAISVMSPDVYISDDGGYTWARM
LEGPHHYAILDSGGLIVAIEHTSQPVNVIEFSTDEGQCWYKYVFSKEPIFFTGLASEPGA
RSMNVSIWGFRGNFLSRKWVSYTIDFSELLSRTCEDKDYTIWLAHSSDPSDPSDGCILGY
KEQYRRLRKSSVCQNGRDYAVTKQPSVCPCTLEDFLCDFGYYRPENQSVCVEQPELKGHD
LEFCLYGRRELLKTSGYRKIPGDKCSGGESPSREEKDMKKKCTSNFLNPSQLAASTSSTP
IILAVVAVLLVTAVAGVLLVKKYVCGGRFLVHRYSVLRQHAEANGVEGIDALDPGTPASK
GGYHDDSDEDLLE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggggccgcgcggggcggcgcggctggcggcggggctgacgctggcgctgggggcggcg
gtggcgctggggctgcgacaccggcaccgggacccccgcggcggcgggatggcggcggcg
gtggcggcggggggcgaggcctgcggcggcctgcgcggcgtcccggccgccctcggtaac
aacacgcaccagtgcgtcttcgatgacctcagcggctccgtgtctctgtcctgggtgggc
gacagcacgggggtcatcctggtcctgacgacgttccaggtgccgctggtgatcatgagc
tttggccagtccaagctctaccgcagcgaggactacggcaaaaccttcaaggacatcacc
ggcctcatcaacaacaccttcatccgcaccgagttcggcatggccatcggcccggaaaac
tcgggaaaggttatcctgacgggcgacgtctccggcggcagccgcggcggcaggatcttc
cgctcctccgattttgccaagaattttatccagacggatttacccttccaccccctggtg
cagatctcctaccacccccaaaaatcccactgcctgctggccctcagcaccgagaacggg
ctctgggtctccaaggatttcggggagacgtgggaggagatccacaaagccgtctgtctg
gccaagtggggtgcgaacgacaccatcttcttcaccacctacctgaacaactcctgcaaa
gctgatctggggttactggagctcaagaaaacctccgacttcggcaaagccttcaaggtc
atcggcaccaagatttactccttcggcctgggaggacgcttcctttttgcctccgttatg
acagagaagggtaccacccggcgcatccacgtctccctcgaccaaggcgagacctggaac
atggcgcagctcccgtccgtcggccacgagcagttttactccatcctggcggcaaacgac
gacctggtgttcatgcacgtggacgagccgggagacacgggttttggcaccatttacacc
tccgacgaccgcggcatcgtctactccaagtccttggagcggcacctctacaccaccacc
ggcggggagaccgacttcaccaacgtcacctccctgcgcggcatctacatcaccagcgtc
ctctccgaagacaattccatccagtccgtgatcacttttgaccgcggcggggagtgggtg
ccgctgcggaaacccaaaaacaccacctgcgactccacggccaggagcaaggaagagtgc
agcctccacatccacgcctcctacagcatctcccagaagctgaacgtccccatggctccc
ctctccgagcccaacgccgtcggcatcgtcatcgcccacgggagcgtcgggggggccatc
tcggtgatgagccccgacgtctacatctcggacgacgggggttacacctgggcccggatg
ctggaggggccgcaccattacgccatcctggactcgggggggctcatcgtggccatcgag
cacaccagccagcccgtcaacgtcatcgagttctcgacggacgaagggcagtgctggtac
aagtacgtcttctccaaggagcccatcttcttcaccgggttggcctcggagccgggggct
cgttccatgaacgtcagcatctggggcttccgcggcaacttcctctcccgaaaatgggtc
tcctacaccatcgacttcagcgagctgctcagcaggacctgcgaggacaaggactacacc
atctggctggcgcactccagcgatcccagcgaccccagcgacggctgcatactgggctac
aaggaacaataccgccggctccgcaaatcctccgtctgccagaacggccgggactacgcc
gtgaccaagcagccgtccgtctgtccctgcaccctggaggatttcctctgcgattttggg
tactaccgaccggagaaccaatccgtctgcgtggagcagccggagctgaagggacacgac
ttggaattctgcctctacggccggcgggagctgctcaaaaccagcgggtaccggaaaatc
cccggggataagtgttcgggaggggagagcccgagccgggaggagaaggacatgaagaag
aaatgcaccagcaacttcctcaaccccagccagctggcggcgtccaccagctccaccccc
atcatcctggccgtggtggccgtgctgctcgtcaccgccgtggccggagtcctcctcgtc
aagaaatacgtctgcgggggcaggttcctggtccatcgctactccgtcctccggcagcac
gcggaggccaacggcgtggaagggatagacgcgctggaccccggcaccccggccagcaaa
gggggctaccacgatgactccgacgaggacctcctggagtga
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