Chroicocephalus ridibundus (black-headed gull): 134525710
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Entry
134525710 CDS
T10910
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crid03041
]
134525710 (DDX20)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134525710 (DDX20)
Spliceosome [BR:
crid03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
134525710 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
CMS1
SiaC
Motif
Other DBs
NCBI-GeneID:
134525710
NCBI-ProteinID:
XP_063212901
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All DBs
Position
20:6665976..6674431
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AA seq
768 aa
AA seq
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MAVPAEAPAAAEGRFRTRDVLVPGGPSDFGSLLLSAPVLAGLEAAGFHRPSPVQLKAIPL
GRCGLDLIVQAKSGTGKTCVFSTIALDAVLLESPATQILILAPTREIAVQIHAVITTIGI
KMEGLECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADK
LLEEGSFQEQINWIYSSLPVNKQMLAVSATYPESLANALTRYMREPTFVRLNPTDPSLIG
LKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTCRGFP
AECISGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPVDWETYMH
RIGRAGRFGTLGLSVTYCCRGEEENTMMKIAQKCNLQLLPLPEPIPPGMMDQFEDGEVEV
KPVVHTGASVNSDTVCLRPEEPVLQPVQNTFSEVPQPLSNLPGGNSSVERPKKALKQKQI
KKCTNSTNTEKGSRKPQTSSCHIEQRSQVKTVSRMDGQHNSQSPDEEALKKNLPRIPCLS
SFKRQQNNPWNFSEFVEDYEYFIKEGLEREVEILRSYSGPGEQCELPRNGGVEWKEVEQN
TEMVVNGVSGDSDGSYSSRASSKSRENSSCFEALSDTPEKNAVPIVRQGHADFCSTPDKP
QELSQVPKQNRGKNKVLKQNAKQKKSHNHQFPSSSMRKTEDNCSCSSWDDGGPYEAWSYK
NYWKSYYQAWQNYYAAVAHYRKSYSHFNWMSAYHVNSVYLQELLKSGD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcccgcggaggcgccggcggctgctgagggacggttccgcacgcgcgacgtg
ttggtgcccggcggcccctccgacttcgggtcgctgctgctgtcggcgccggtgctggcg
gggctggaggcggctgggttccacaggccgtcgccggtccagctgaaggccatcccgctg
gggcgctgcggcctggatctcatcgtgcaggccaagtcgggcactggcaaaacctgcgtg
ttctccaccatcgccctggacgcggtgctgctggagagccccgccacgcagattttgatc
ctggctcctacacgagagattgctgtgcagattcatgctgtcatcacaactattggaata
aaaatggaaggcttagaatgccatgtcttcattggtgggactcctttgaaccaggacaaa
atcagactaaagaagtgccacatcgcagttggctccccaggtcgaataaaacagctcata
gagttggactacttgaatacagccagtattcggcttttcattcttgatgaagcagacaag
cttctagaagaaggcagcttccaggaacaaatcaattggatttactcttcactaccagtc
aataaacagatgcttgctgtttcagctacttatcctgagtcattagctaatgctttgacc
aggtacatgagagagccgacatttgtgaggttgaaccctactgatccaagtctcattggg
ctgaagcagtattacaagattgtgaattcccatccgcttccacataaaacatttgaggaa
aaaacccagcacctacaggagctgttcagcaaaattccatttaatcaagccttagtcttc
tcaaatttgcatagcagggctcaacatctagctgaaatactgacatgcagaggctttcct
gctgagtgcatttcaggtagcatgaatcaaaatcaacgacttgatgctatggctaaatta
aagcaattccactgtagagttctgatttccacagacttgacatctcgtggaattgatgct
gaaaaagtgaatctagttgtcaacctggatgtacctgtagactgggaaacgtacatgcat
cgtattggcagagctgggcgctttggaactttaggcttatctgtgacatactgctgccgt
ggagaggaagaaaacacaatgatgaaaattgctcagaaatgtaatcttcagcttcttccg
ctaccagagcctataccccctggaatgatggatcaatttgaagatggggaggtagaagtc
aaacctgttgtacatacaggtgcttcagtgaattctgacactgtgtgtcttagaccagag
gaaccagtactgcagcctgtccaaaatactttttcagaggtacctcagcctctttctaat
cttccaggtggtaattcttctgtagaaaggccaaaaaaggctctaaagcaaaagcagata
aaaaagtgcacaaattctacaaatacagaaaaaggtagcagaaaaccccaaacttccagt
tgccacatagaacagaggagtcaagtcaaaactgtctccagaatggatgggcaacataac
agtcagtctccagatgaggaggccttaaaaaaaaatcttcccagaattccatgcttgtca
tctttcaaaagacaacagaacaatccctggaacttctcagagtttgttgaagactatgag
tatttcattaaagaagggttggagagagaggttgaaattttaagaagctattcaggccca
ggagaacagtgtgagctccccagaaatggtggtgtagagtggaaagaggtggaacaaaat
acagagatggtagtaaatggtgtgtctggtgacagtgatggttcctacagttccagggct
tcctccaagagtagggaaaacagctcatgctttgaagcactttcagacacaccggagaag
aatgctgttcccatagtgcgtcagggtcatgcagacttctgttctacaccagacaaacct
caggagctatcacaagtcccaaagcaaaatcgagggaaaaacaaagttctgaaacaaaac
gctaaacaaaagaaaagccataaccatcaattccctagttcttccatgagaaaaactgaa
gacaactgctcctgcagctcttgggatgatggtggtccgtatgaggcatggagttacaaa
aactactggaaatcttactatcaagcatggcaaaactactatgctgcagtggctcactac
aggaaaagttacagtcacttcaactggatgagtgcctatcacgtcaactcagtctacctt
caggaactgctgaaaagtggtgactga
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