Chroicocephalus ridibundus (black-headed gull): 134525764
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Entry
134525764 CDS
T10910
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134525764 (PPFIBP1)
Membrane trafficking [BR:
crid04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134525764 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
DUF4407
Motif
Other DBs
NCBI-GeneID:
134525764
NCBI-ProteinID:
XP_063213026
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All DBs
Position
1:complement(145384513..145503400)
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AA seq
1038 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGGLRALHLVEDLRGLLE
MMEADEREGLRCQIPDSTAEALIEWLQSQMTNGHISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEISTLK
LKLTSVEKDSLEYEDRFRDTKDLIQEINELRLRVGEMDNERLQYEKKLKTTKSLMAKLSS
MKIKVGQMQYEKQRMEQKSQILKDELAALKDKLEQKEAEVKRLQEKLVCKLKGEGIEILD
RDENCKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEELRQSLNRYKKVQDMVILAQGK
KGKESDSEDFLNSGSVSTVLLDTPSLTDPEKSPSPTPVTASPIHDEFNMNIHEENSLQIH
TSILQISIPSFSSTSKSSETVAEKVKTQPRPDPASEISAGRSIGSSPETQLCDSPVTSSL
QKSSSLSSLRKETSEADRDSAQKPTEVKPPVEGNNFATLPPKSPSHGGTGDEDSFGTRKA
RSSFGRGFFKIKNNKRTASAPNLDRSRSASAPTLAETEKGSADHLDLAGLPPRPKETDSL
QMTPPSPDSKKKARGIKRLFGRLKRSQSTTFNPDDMSEMEFRRGGTRATAGPRLGWSRDL
GQSRNELDMPFAKWTKEQVCNWLQDQGLGSYINNGKHWILSGQTLLQASQQDLEKELGIK
HPLHRKKLQLALQALGSEEENNHGKLDYHWVTRWLDDIGLPQYKTQFDEGKVDGRMLHYM
SVDDLLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENNVTPSEVTQWTNHRVM
EWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETVAQLLNIPPNKTLLRRHLATHFNLL
IGQEAQQQKREAMESPDYVLLTATAKVKPKKLAFSNFGSLRKKKQDDVEEYVCPMELGRA
SGSGSKKGFKPGLDIRVYDDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFK
DFAACSPSTSITDEDSNV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgctcgctgcggctctggagcagatggatggcattata
gcaggttcaaaggcgctggaatactccaatggtatctttgactgccagtcccccacttcc
cctttcatggggggcctgcgggcgctgcacctggtggaggacttgcggggcttgctggag
atgatggaagcagacgagagagaggggctgcgctgccagatcccagactcgacggcggag
gctctgattgaatggctccaaagtcaaatgactaatgggcatatatctgggaatggagat
gtgtatcaagaaaggctggctcgtctggaaaatgataaggaatctcttgttcttcaagta
agtgtgcttacagaccaggtggaagcccaaggagaaaagattcgggatctggagttctgt
ctagaggagcacagggagaagctgaatgccacagaagagatgctgcagcaggagctttta
agcagaacatcccttgaaactcagaagctggatcttatggcagagatttccactctgaag
ctaaagcttacatctgtagagaaggatagcttggagtatgaggacagattcagagacaca
aaggatttgatccaggaaataaatgagttgcggttgagagtgggagaaatggacaatgaa
agactccagtatgagaaaaaactgaaaacgaccaaatctttaatggccaaactttctagt
atgaaaatcaaagtgggtcagatgcagtatgaaaagcagcggatggagcaaaaaagccag
attctaaaggatgagctagcagctttgaaagacaaactggagcagaaggaagccgaggta
aaaaggttgcaagaaaaactggtttgcaagctgaaaggagaagggattgaaatactggac
agagatgaaaattgtaaaaagaagctcaaagataaaaatatagaggtacagaaaatgaag
aaggcagtagaatctctaatggcagcaaatgaagagaaggatcggaagatagaagagctt
cggcaatctctgaataggtacaagaaagttcaggacatggtgatattggctcaaggtaaa
aaaggcaaggaaagtgacagtgaagacttcttgaactcagggtctgtttccacagtttta
ttggacacaccaagtttgactgacccagagaaaagcccatccccaactccagtaacagca
tctccaatccacgatgagtttaacatgaatatacatgaagagaattccttacagatccac
accagtattttacagatttcaatcccttctttttcatcaacatccaagagctcagaaact
gttgcagagaaagtgaaaacacagccaaggccagatcctgcaagtgaaataagtgcagga
agatcaataggttcctccccagaaacacagctgtgtgatagtccagtaacttcttcgctg
cagaagtccagcagtctgagcagtctgagaaaagagacatccgaagcggacagagactct
gcacagaagccaacagaggttaaacctcctgtggaaggtaataattttgcaaccctccct
ccaaagtctccttctcatggtggcacaggcgatgaggatagttttggtacccggaaagcc
agatcttcgtttggacgaggctttttcaagataaaaaataacaagaggaccgcgagtgcc
cccaatctggatcgcagtcgaagtgcaagtgcacctactttagctgaaacagagaaggga
tctgcagatcacttggatctggctggcttgccccctcgcccgaaagaaacagatagtcta
cagatgacgccaccttctccagattccaagaaaaaggccagggggatcaagaggttattt
ggaagacttaaaagaagtcagtcaactaccttcaacccagatgacatgtccgagatggag
ttcagaagaggagggacaagagcaaccgcagggccacgactgggctggtctcgggacctg
gggcagtctcgcaatgagctggacatgccattcgcaaagtggacgaaggagcaggtttgc
aactggctccaagaccaagggctaggctcttacattaataatggcaaacactggatactg
tctgggcaaacgcttctgcaggcttctcagcaggatctggaaaaggagcttgggataaag
cacccgttgcatcggaagaagcttcagcttgctctgcaggcactcgggtctgaagaggaa
aacaatcatggaaaactggattaccactgggtcaccaggtggctggatgacattggcctc
ccccagtataagacccagtttgatgaagggaaggtggacggccgaatgctccattacatg
agtgtggatgacttgctgtccttgaaagttgtcagcgtcctccaccacctcagcatcaaa
agagccattcaggttttgagaataaataactttgagcccaactgtctgcgcaggaggcca
tctgatgagaataacgtcacgccttctgaggtcacccagtggaccaatcatcgcgtgatg
gagtggttacgttccgttgatctggcagagtatgcacctaacctgcgggggagcggtgtg
catgggggactgatggttttggagcctcgtttcaatgtagaaactgtggcacagttgctg
aacatcccaccgaacaagacactactgagacggcacctggcgactcatttcaacctcctc
attgggcaggaggcccagcagcagaaacgcgaagccatggagtccccagactacgtcctc
ttaacagcaactgcgaaagtaaagccaaagaaacttgccttcagcaattttgggagcctg
aggaagaagaagcaagatgatgtggaagagtatgtgtgtcctatggagctggggcgggca
tctggaagtgggtcaaagaagggttttaagcctggcctggatatccgagtatatgacgat
gatgatttggacaggctggagcagatggaagattcagaagggacagtgaggcaaatagga
gcattttctgaaggcatcaacaacttgacgcacatgttgaaagaagatgaaatgtttaaa
gactttgcagcttgctctcctagcaccagtataacagatgaggactccaatgtgtga
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integrated database retrieval system
