Chroicocephalus ridibundus (black-headed gull): 134525870
Help
Entry
134525870 CDS
T10910
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134525870 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
crid04990
]
134525870 (SNX27)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Others
Others
134525870 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
crid04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134525870 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
PDZ
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
PDZ_2
SNX17-31_F2_FERM
Dickkopf_N
TetR_C_26
RA_3
Motif
Other DBs
NCBI-GeneID:
134525870
NCBI-ProteinID:
XP_063213233
LinkDB
All DBs
Position
21:2665980..2699853
Genome browser
AA seq
553 aa
AA seq
DB search
MADEEGEGLPRSAAAAQRNGGGEGAPGGPGGPRVVRIVKSESGYGFNVRGQVSEGGQLRS
INGELYAPLQHVSAVLGGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELI
LTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISIPTYKHVEQNGEKFVVYNVYMAG
RQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSI
RVIGESDIMQEFLSESDENYNGVSDVELRVALPDITTVTVRVKKNSTTDQVYQAVAAKVG
MDSITANYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEVL
LNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLCEQRKMVMYLNMLRTCEGYNEIIF
PHCSCDSRRKGHVITAISIKHFKLHACTEEGQLENQVIAFEWDEMQRWDTDEEGMAFCFE
YARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATGKDNENCSKDNMCSKNI
FQMVRSQQRDAAT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggagggcgaggggctgccgcgctcggcggcggcggcgcagcggaacggc
ggcggggagggggccccggggggcccgggcgggccccgcgtcgtccgcatcgtcaagtcg
gagtccggctacggcttcaacgtccgcggccaagtgagcgagggcggccagctgcggagc
atcaacggcgagctctacgccccgctgcagcatgtcagcgccgtgctgggcggcggggcg
gccgaccgcgccggggtgcgcaagggggaccgcatcctggaggtgaacggggtgaacgtc
gaaggagcgacgcacaagcaagtggtggacctgatccgcgcaggagagaaggagttgatc
ctgacggtgttgtcggtgcctccccacgaggcagacaatctggatcccagcgacgactct
ttggggcagtcgttctatgactacacagaaaaacaagccgtgcccatctccatccccacc
tacaagcacgtggagcaaaacggcgagaagtttgtggtctacaatgtttacatggcgggc
cgccagctctgctccaagcggtaccgggagtttgccatcctgcaccagaacctgaaacgg
gaattcgccaacttcacttttccacgtctcccggggaaatggcccttctctttgtcggag
cagcagctggacgcccggcggcgagggctggaagagtacctggagaaagtgtgttcgata
cgcgtcattggggagagcgacatcatgcaggagttcctctcggagtcggacgagaattac
aacggcgtctcggacgtggagctccgggtagcgctaccagatataacgacagtgacggtc
agagtcaaaaagaacagcactacagaccaggtctaccaggctgtggctgccaaagtcgga
atggacagtattaccgcaaactacttcgccttgtttgaagtgatcaatcactcctttgtg
cgcaaactggcgcccaacgaattcccccacaaactctacgtgcagaattacacctcggcg
gtgccgggaacgtgcctgaccatccggaaatggctcttcactacagaggaggaggttctt
ctcaatgacaatgacctggcggtcacctacttcttccatcaggctgttgatgacgtcaag
aaaggctacatcaaagcagaggagaagtcctaccagttacagaagctgtgtgagcagaga
aagatggtcatgtatttaaacatgttacggacgtgcgagggttacaacgagatcatcttc
ccccattgctcctgtgactctcggcggaagggacatgtgatcacagccatcagcatcaag
cactttaaactccacgcctgcaccgaggaggggcagctggagaaccaggtaatagcattc
gaatgggacgaaatgcagcggtgggacacggacgaagagggaatggcattttgttttgaa
tacgcacgaggagagaagaaaccccgatgggttaaaatcttcaccccctatttcaactac
atgcacgagtgcttcgaacgggtcttctgcgagctcaagtggaggaaggaggtggaggag
gaagcaacaggcaaggataacgagaactgcagtaaagacaatatgtgcagcaagaacatc
tttcagatggtcaggtcacagcagagggacgcggccacttag
DBGET
integrated database retrieval system
