Chroicocephalus ridibundus (black-headed gull): 134525890
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Entry
134525890 CDS
T10910
Symbol
DENND4B
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134525890 (DENND4B)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134525890 (DENND4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
134525890
NCBI-ProteinID:
XP_063213268
LinkDB
All DBs
Position
21:complement(4038209..4047652)
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AA seq
1537 aa
AA seq
DB search
MSDEKPPQLVDYFVVAGLTDTSRPLEEENQQHRAARPSEPITDVAVIIRSQGEEVPHGFT
CIETTTSGHPVDLNAGLLNNPQMFICYKRSRDKPPLIELGVHYEGKDRPKPGYKILDTTP
YSRSANLNSGGPGHQRTFLTYRRAAEPHGHNTLGVTDICLIMPSKGESTPHTFCRVDKNL
NTSMWGPALFLCYKIAMAKANTLVYEAGLLGRYPEQDSESFPLPESVPVFCLPMGATIES
WPADTKYPLPVFSTFVLTGASGDKVYGAAIQFHEAFPRERLSEKQSLRLGLLSVVDRRPV
AGRSLQTRKSICVLSHWPFFDVFRKFLMFIYRYSISGPHVLPLETHISHFMHNVPFPSPQ
RPRILVQMSPYDNLLLCRPVSSPLPLSGASFLTLLQNLGPDNAVALLVAVLTEQKLLIHS
LRPDVLTSVGEALVAMIFPLRWQCPYIPLCPLALADVLCAPVPFIVGIHSSYFDLYEPPR
DVIFIDLDTNTIFQSEERKLLSPRSLPRRPCKVLLASLHSLSQQLDEMYSGPGEEASLEL
LLSDAEAARGRRAQLELEARAAFLRFMACVLRGYRSFLRPIAPAPAPAGRDASSLFALQA
FLKSRERAYHRFYGQLLRTQLFTQFIEDCSFASDRDPCLEFFDTCVDKVQAELEKPEDTP
LMELDDPRGGEHTVFITPPEQPAGPDGTELPARVPVRPPPYTPRLRHPPGPPNSASAPTP
PPSYDGFPTLRPELLEPPRDPLVAQLCQARSSAPSSPAPRRTKQEMKVAQRVAQKYSSVP
EMWAKCLLGHCYGLWFLYLPTHVRAAPAKLRALQLAYDVLRKMEAHKVVLPDEVCYRILM
QLCGQYGEPVLSVRVLLEMKRAGIVPNTITYGYYNKAVLESKWPAGTQGGRLRWAKLRNV
VLGAAQFRQPLRQRERRAAAAPSGKVGMGGAGGASVTPLTAPLSPPAGGRAPPAPRPSLQ
RQTTWAGRSLRDPPAAPRLVKSGSLSFPGSTQAEGSQGGPGEPPTTQPPLLPAAPDPLPP
RLRGPPGSADGSLSDISFATDESDRADEGPGGAGGVAGGTPRRGLAAKLQQLLSPGKRSP
LRPAASAELPTGSRDAAAGPRRGSEQRDGDPPPRRSPAETLLRPRERPESTASESSVSLG
SELDLSDTSVGSTGIPKSAEPPADRATGQEPPAVEVLLSSCSRCQGCGALVYDEEVMAGW
TSDDSNLNTTCPFCNRSFVPFLSIEIQDFQLPPSATEDGSLPPPTAQGPVLSDRRHCLAL
DEAEPELCNGYPDTAVPRRSERVAFAYLSPLVLRKELESLVENEGGEFLAQPELVDSHPI
IYWNLVWYFQRLGLPSNLPHLLLGSQHVAPAPQVKWGAMGGGIGGGRQPSGHLPVPQMQP
PESPCVRIRLLWDVLAPEPDSSPPLYVLWRLQSKIPTRLQSWQPHGHPFSPAFLGAVMNH
VGLSEVHKAITLLLETLPAPGGPRHPQRSIYREILFLTLAALGRDHMDIAAFDKKYKSAY
NKLAGSLGKEELRRRRAQPPSSKAIDCRKSFGATLEC
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaagcccccgcagctggtggactacttcgtggtggccggactgacagac
acctcgcggccgctggaggaggagaaccagcagcaccgcgcggcccgtcccagcgagccc
atcaccgacgtggccgtcatcatccgctcgcagggcgaggaggtgccccacggcttcacc
tgcatcgagaccaccacctcgggccaccccgtcgacctcaacgccgggctgctcaacaac
ccccagatgttcatatgttacaagcggagccgcgacaagccccccctcatcgagttgggg
gtgcactacgagggcaaggaccgcccgaagccgggctataagatcctggacacgaccccc
tacagccgctcagccaacctcaattcgggggggccgggacaccaacgcaccttcctgacg
taccggagggcagccgagccccacggccacaacacgctgggggtcactgacatctgcctc
atcatgcccagcaagggcgagagcaccccccacaccttctgccgggtggacaagaacctc
aacaccagcatgtggggccctgccctgttcctgtgctacaagatcgccatggccaaggcc
aacacgctggtctacgaagcagggctgctgggacgttaccccgagcaggacagcgagtcc
ttccccctgcccgaatcggtgcccgtcttctgcctgcccatgggggccaccatcgagagc
tggccggccgacaccaagtacccgttgcccgtcttctccaccttcgtgctgactggcgcc
tcgggcgacaaggtgtatggggcagccatccagttccacgaggcctttccccgggagcgg
ctgtcggagaagcagagcctgcgcctggggctgctgagcgtggtggaccgacggccggtg
gccggccgctcgctgcagacccgcaagagcatctgcgtcctctcccactggcccttcttt
gacgtcttccgcaagttcctcatgtttatctaccgctactccatctcggggccccacgtg
ctgcccctcgagacgcacatctcccacttcatgcacaacgtccccttcccgtccccgcag
cggccgcgcatcctggtccagatgtccccgtatgacaacctgctgctgtgccggcctgtg
tcctccccgctgccgctcagcggcgccagcttcctgacgctgctgcagaacctgggccct
gacaacgcggtggcactgctggtggccgtgctgaccgagcagaagctgctcatccactcc
ctgcgccccgacgtcctgaccagcgtgggcgaagccctggtggcgatgatcttccccctg
cgctggcagtgcccctacatcccgctgtgcccgctggcgctggctgacgtgctgtgtgcc
cccgtgcccttcattgtaggcatccactccagctacttcgacctctacgagcccccccgg
gacgtcatcttcatcgacctggacaccaacaccatcttccagagcgaggaacgcaagctg
ctgtccccccgctccctgccccgccggccctgcaaggtgctgctggcctcgctacacagc
ctctcccagcagctggacgagatgtacagcgggccgggggaggaggcgtcgctggagctg
ctgctgagcgacgcagaggcggcgcggggccggcgagcgcagctggagctggaggcgcgg
gcggcgtttctgcgcttcatggcctgcgtcctgcggggttatcgctccttcctgcgcccc
atcgccccggcgcccgccccggccggccgcgacgccagcagcctcttcgccctgcaggcg
ttcctcaagtcccgggagcgggcgtaccaccggttttacgggcagctgctgcgcacccag
ctcttcacccagttcatcgaggactgctccttcgccagcgaccgagacccctgcctcgag
tttttcgacacctgcgtggataaggtgcaggcagagctggagaagccggaggacaccccc
ctgatggagctggatgacccgcgggggggcgagcacactgtcttcatcaccccccctgag
cagccggcgggtcccgatggcaccgagctgcctgcgcgggtaccggtgagacccccccct
tacaccccccggctccgccaccccccgggtccccccaactcagcctctgctcccaccccc
ccccccagctatgacgggttccccaccctgcgccccgaactcctggagcccccccgcgac
ccgctggtggcccagctgtgccaggccaggagcagtgcccccagcagcccggccccgcgc
aggaccaagcaggagatgaaggtggcccagcgtgtggcccagaagtattcctcggtgccc
gaaatgtgggccaagtgcctgctggggcactgctatggcctctggttcctctacctgccc
acccacgtccgcgccgcccccgccaagctgcgggcgctccagctggcctacgacgtcctg
cgcaagatggaggctcacaaagtggtgctgccggatgaggtctgctaccgcatcctgatg
cagctctgcgggcagtacggggagccggtgctgtcggtgcgggtgctgctggagatgaag
cgcgccggcatcgtgcccaacaccatcacctacggctactacaacaaggcggtgctggag
agcaagtggccggcaggcacccagggcgggcgcctgcgctgggccaagctccgcaacgtg
gtgctgggggccgcacagtttcggcagcccctgcggcagcgggaacgccgggctgccgcc
gccccctcaggtaaggtggggatggggggggccgggggggcctctgtcacgccgctgaca
gcccccttgtcccctcccgcaggtggccgagctcccccggcgccccgtcccagcctgcag
cggcagaccacctgggccgggcgcagcctgcgggacccacctgcagccccccggctggtg
aagagcggcagcctcagcttccccggcagcacccaggctgaggggagccagggggggccg
ggggagccccccactacccagcccccccttcttcccgcagccccagacccgctgcccccc
cggctgcggggtccccccggctcggccgatgggagcctgtcggacatcagctttgccacg
gatgagagcgaccgggcagacgaggggccggggggtgccgggggggtggcggggggcaca
ccgcggcgggggctggccgctaagctgcagcagctgctgtcccctggcaagcggtccccc
ctccggccggccgccagcgccgagctccccaccggatcccgggatgccgccgccggccca
cgccggggctccgagcagcgggacggggaccccccgccacgccgcagccccgccgagacc
ctgctgcgcccacgggagcgccctgaatccaccgcctccgagagctccgtctcgctgggc
agcgagctggacctgtcggacacgtcggtgggcagcaccggcatccccaagtccgccgag
ccaccggctgacagggcaacggggcaggagccgcccgccgtggaggtcctgctgtccagc
tgctcgcgctgccagggctgcggcgcgctggtgtacgacgaggaggtgatggcaggctgg
acctccgacgactccaacctcaacaccacctgtcccttctgcaaccgctccttcgtcccc
ttcctcagcatcgagatccaggacttccagctgccccccagtgccaccgaggatggctcc
ctccctcctcccaccgcgcagggaccagtgctcagcgaccgccgccactgcctggccctg
gacgaggccgagccggagctctgcaacggctacccggacacagcggtgccgcggcggtcg
gagcgggtggctttcgcctacctgagcccgttggtgctgcggaaggagctggagagtttg
gtggagaacgaaggcggcgaattcctggcgcagccggagctggtggacagtcaccccatc
atctactggaacctcgtctggtacttccagcgcctggggctgcccagtaacctcccccac
ctgctcctgggctcccagcacgtcgccccggccccgcaggtaaagtggggggctatgggg
gggggaattgggggtggccgccagcccagcggtcacctgcctgtcccgcagatgcagccc
cccgagtccccctgcgtccgcatccggctgctctgggatgtcctggcccccgagcccgac
agcagccccccgctttacgtcctctggcggcttcaaagtaaaatccccacccggctgcag
tcctggcagccccacggccaccccttctcgccagccttcctgggggccgtgatgaaccac
gtggggctgagcgaggtgcacaaggccatcacgctcctcctggagacgctgccagcacca
ggtggcccccgccacccccagaggagcatctaccgggaaatcctcttcctcacgctggcg
gcgctgggcagggaccacatggacatcgccgcctttgacaagaagtacaagtctgcctac
aacaagctggcggggagcctgggcaaggaggagctgcggcggcggagggcgcagcccccc
agctccaaagccatcgactgccgcaagagcttcggggccaccctcgagtgctag
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