Chroicocephalus ridibundus (black-headed gull): 134525977
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Entry
134525977 CDS
T10910
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10 isoform X1
KO
K06586
integrin alpha 10
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04510
Focal adhesion
crid04512
ECM-receptor interaction
crid04810
Regulation of actin cytoskeleton
crid04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134525977 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134525977 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134525977 (ITGA10)
04810 Regulation of actin cytoskeleton
134525977 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134525977 (ITGA10)
Cell adhesion molecules [BR:
crid04515
]
Integrins
Integrin alpha subunits
134525977 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
Integrin_A_Ig_3
VWA_2
GAE_BBS1
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
134525977
NCBI-ProteinID:
XP_063213411
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All DBs
Position
21:2171797..2193116
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AA seq
1166 aa
AA seq
DB search
MEGGGCRRLLRVLLLLPGLCLGFNVDVRRPRVFPGPAQGQFGYKVLQRASGGDKWLLVGA
PWDGDRQGDIYKCRVGPPNATCAKANLGSAAPWLVPLPGHSVHLGMTLLDSRDGGFVACA
PLWSQECGTSLYSTGLCARLDGDLRPVGTLAPTAQRCSTYMDIVIVLDGSNSIYPWYEVQ
NFLSNVLSKFFIGPGQIQVGVLQYGERAVQEWALGRYRTAQEVVEAAKNISRQEGRETRT
ALAIHRACTEAFSPEQGGRADATRLMIVVTDGESHDGEELPEALAECEKRNVTRYAIAVL
GHYLRRQQDPEDFIREIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGYNE
SSFELEMSQIGFSIHLLEDGILFGTVGAYDWDGAVLEESRRGRIIPPRKAFQEEFPLELK
NHAAYLGYAVSSLRLPGGQRLYVAGAPRFQHKGKVILFQMDTTGTVTVAQALTGEQIGSY
FGSEVCVLDVDGDGVTDVLLVAAPMYLGAQSRETGRVYLYRVGQRLLAPAGTLHADKKPQ
DARFGYALAAVPDLNHDGFNDVVVGAPLEDGHRGAVYVYHGAPGTLLPHYKQRIEAAALG
PTLSYFGRSLDGRLDMDGDGLVDLAVGAQGAAVLLRSRQIVQVNTSLTVEPPAINVIQKN
CQRSGTGAVCLRARVCFRAGTRARGQRDRDIELRYNVSLEERTPGARAAFDSGARRLLQR
RLELSLGRQSCLRFPFHVLDTTDYLRPLSFTVRLAMAESTGPVLDETSPTTIRKLIPFFK
DCGEDDECVTDLVLRATMDIVGSRQSPHVLRKGRRKVMVDVVLENKKENAYNASLLLRFS
SNLHFSSLALQQDTSSVKLECTALAGHRRLCSVGYPVFRSLAKVSFTLELEFSCSVLLDR
AEVALEASSDSTEATPEDNALRLSAPIRYEPDLFLSSDANLHRYEVHPLGTFPHGPGPEF
KTTVKVQNLGCYPVRNLTLLMALPALGYRRATFLSVTRVLADNATCTLRTPPEEPRQRGT
ATVVPVHPEDLLRVDRLDCANAWCQELSCRLGRLDRGGEASIHVLRAIHNDFFRGAKFRS
VRVVSTVWLGVPGSSVLMLEEGAHRREMVLEIIQAKRVPVSLWILVGSILGGLLLLALII
FCLWKLGFFTRKKLPEEEEEEEKEEQ
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggtgggtgccggcggctcctccgggtgctgctcctgctcccagggctgtgc
ctggggttcaacgtcgacgtgcggcggccgcgggtcttccccgggccagcccagggccag
tttggctacaaggtgctgcagcgggcgagcggcggggacaagtggctgctggtgggggcc
ccgtgggacggggaccgccaaggtgacatctacaagtgccgcgtgggaccccccaacgcc
acctgcgccaaagccaacctcgggtccgcagccccttggctcgtccccctccccggccac
agcgtccacttggggatgaccctcctggactccagggacggcggcttcgtggcttgcgcc
ccgctttggtcccaggagtgcggcacctccctctacagcaccggcctctgcgcccggctg
gatggtgacctccggccggtggggaccctcgcgcccacggcccagcgctgctccacctac
atggacatcgtcatcgtcctggacggttccaacagcatctacccctggtacgaggtgcag
aacttcctcagcaacgtcctcagcaagttcttcatcgggccggggcagatccaggtgggg
gtgctgcagtacggggagcgggcggtgcaggagtgggcgctggggcggtaccgcacggcg
caggaggtggtggaggcggccaagaacatcagccggcaggagggcagggagacgcgcacg
gcgctcgccatccaccgcgcctgcaccgaagccttcagccccgagcagggcgggcgggcg
gatgccacccggctgatgatcgtggtgacggacggggagtcccacgacggcgaggagctg
cccgaggctctggccgagtgcgaaaagcgcaacgtcacccgctacgccatcgcggtgttg
gggcactacctccgccggcagcaggaccccgaggatttcattcgcgagatcaagtacatc
gccagcgacccggacgagaaatacttcttcaacgtcaccgacgaggccgccctcaacgac
atcgtggatgccttgggtgaccgcatcttcagcctggaaggcacccacgggtacaacgag
agctccttcgagctggagatgtcccagatcggcttctccatccacctcctggaggacggg
atcctcttcggcacggtgggagcctacgactgggacggggccgtgctggaagagagccgg
cgcggccgcatcatcccgccccgcaaagccttccaggaggaattcccgttggagctgaag
aatcacgcggcttatttgggttacgccgtctcctcgctgcggctccccggggggcagcgc
ctgtacgtggccggggccccccgcttccagcacaagggcaaggtgatcctcttccagatg
gacaccacggggaccgtgacggtggcccaggcgctgacgggggagcagatcggctcctac
ttcggcagcgaggtgtgcgtcctggacgtggacggcgacggggtcaccgacgtgctgctg
gtggcagctcccatgtacctgggtgcccagagcagggagacggggagggtgtatctctac
agagtggggcagaggctcctggcccctgccggcaccctgcacgccgacaagaagccgcag
gatgcccggttcggctacgccctggccgccgtgcccgatctcaaccacgacggtttcaat
gacgtggtggtgggggctccgctggaggacgggcaccgcggcgccgtctacgtctaccac
ggcgccccgggtaccctcctgccccattacaagcagcgcatcgaggcggcggcgctgggt
ccgaccctcagctatttcgggcgcagcctggacgggcggctggacatggatggggacggg
ctggtggacctggccgtgggggcgcagggggcggccgtgctgctgcggtcccgccagatc
gtccaggtcaacacgtcgctgacggtggagccaccggccatcaacgtcatccagaagaac
tgccagcgcagcggcaccggcgccgtctgcctccgggccagagtctgcttccgtgctggg
acccgcgcccggggccagcgggacagggacatcgagctccggtacaacgtgtccctggag
gagaggacgccgggagcccgggctgccttcgactccggcgctcggcggttgctgcagcgt
cgcctcgagctctcgctggggcggcagagctgcctccgcttccccttccacgtcctggac
accacggactatctgcgacccctcagcttcacggtgaggttggccatggccgaatccacc
ggcccggtgctggatgagacgtcccccaccaccatccggaaactgatccccttcttcaag
gactgcggggaggacgatgagtgcgtcacggacttggtgctcagggccaccatggacatc
gtgggctccaggcagagcccccacgtcctgcgcaagggcaggaggaaggtgatggtggac
gtggtcctggagaacaagaaggagaacgcctacaacgccagcctgctcctccgcttctcc
agcaacctccacttctccagcctcgcgcttcagcaggacaccagctcggtgaagctggag
tgcacggcgctggcaggtcaccgtcggctctgcagcgtcggctaccccgtcttccgctca
ctggccaaggtctccttcaccctggagctggagttcagctgctccgtcctcctcgaccga
gccgaggtcgccctcgaggccagcagtgacagcaccgaggcgacgccagaggacaacgcg
ctccggctttctgcccccatccgctacgagcctgacctcttcctctccagcgacgccaac
ctgcaccgctacgaggttcaccccctcggcaccttcccccacggccctggccccgaattc
aagaccacggtgaaggtgcagaatttggggtgctacccggtccgaaacctcaccctcctc
atggccctgccagccctgggctaccgccgcgccaccttcctctccgtcacacgcgtcctg
gccgataacgctacctgcacgctgcggaccccccccgaggagccgcggcagcggggaacg
gccacggtggtcccggtgcaccccgaagacctcctgcgcgtggacaggctggactgcgcc
aacgcctggtgccaggagctgagctgccggttggggcggctggaccgcggcggggaggcc
tccatccacgtcctccgcgccatccacaacgacttcttccgtggggctaaattcaggagc
gtgagggtggtcagcacggtctggctgggggtcccggggagcagcgtgctgatgctggag
gagggggcgcatcggagggagatggtccttgaaatcatccaggcgaagcgggtgcccgtc
tccctctggatcctggtgggcagcatcctgggggggctgctcctcctggccctcatcatc
ttctgcctgtggaagctgggcttcttcacccgcaagaagctccccgaggaggaggaggag
gaggagaaggaggaacagtga
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