KEGG   Chroicocephalus ridibundus (black-headed gull): 134526207
Entry
134526207         CDS       T10910                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03020  RNA polymerase
crid03420  Nucleotide excision repair
crid04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    134526207 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134526207 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    134526207 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crid03021]
    134526207 (POLR2E)
   03400 DNA repair and recombination proteins [BR:crid03400]
    134526207 (POLR2E)
Transcription machinery [BR:crid03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     134526207 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     134526207 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     134526207 (POLR2E)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      134526207 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1 DUF7890
Other DBs
NCBI-GeneID: 134526207
NCBI-ProteinID: XP_063213914
LinkDB
Position
22:3896536..3900278
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacttaccggctgtggaagatccgtaagaccatcatgcagctc
tgtcacgatcggggctacctggtgacccaggacgagctggatcagacgctggaggagttc
aaggcgcagttcggtgacaaacccagcgaggggcggccccgccgcaccgacctgacggtg
ctggtggctcacaacgacgatccaaccgaccagatgttcgtcttcttcccggaggagccc
aaggttggaataaagacgatcaagatgtactgccagaggatgcaggaggagaacatcacc
agagcgctgatcgtggtgcagcaaggcatgactccctcggcaaagcagtccctggtagat
atggctcccaaatacatcctggagcagttcctgcagcaggagctgctgatcaacatcaca
gagcacgagttggtcccggagcacgttgtcatgacaaaggaagaagtaaccgagctactg
gccagatataaactccgagagaaccagctcccgaggatacaggccggggatcctgtggcc
cggtacttcggaataaagcgtggtcaggtggtgaagatcataagaccgagtgagactgcg
ggccgctacatcacctacagactggtgcagtga

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