Chroicocephalus ridibundus (black-headed gull): 134526210
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Entry
134526210 CDS
T10910
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134526210 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crid03009
]
134526210 (REXO1)
Ribosome biogenesis [BR:
crid03009
]
Eukaryotic type
Pre-60S particles
RNases
134526210 (REXO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
134526210
NCBI-ProteinID:
XP_063213919
LinkDB
All DBs
Position
22
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AA seq
1230 aa
AA seq
DB search
MLRSTGYFRGIDCPFLNAGGPGGGPPCRRPYCHFRHPPVAAAAAAAAAARCGVSGGHGAE
RGYDPYNPELPRPSLEAEDGALADITDVTPGILELELVNKAIEAVKNEVEREQKKYEELL
ETTKELSASEASSLISNTPVSAAGTQNDSLTSLEYNPGSYNFNNNSDYNPTPLAAASQSS
KYTLDSSRCKGSSLEYVPKAIVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYSARLL
SKATTKEPKGSKRGRVSSYEESYSPSRKKLCEVPDDYEARFSSSEDETDADYKTTSVSSQ
SKAGSESESSDRLSNKEQSTKLDDFASWDSKEAAAQYGTEDLTSSQKNLAKNLPDKNAKA
AKLCSGKNDREIENKNKDSKDKTKRKKSDVSKTPGLSEVGKKEKSKNTEKDKGLKKEEKL
KTKNDEKNCKDKSVKVKTDGNSKKPEKQKSEKVDGLKKEKSKSSSSSSGKSKSEDAIKGS
STEKLGSSKKDSKLKATDLKNGKESSGRKNKEKGTKTPALERKKEKVSSTEKGDPKKSRK
QRSLSHVDLFGDESGDDDDKSRPLASTFLDVSSNSDGDDCGSDSESENEGTKKVKRSKLS
KSSSSSSTSDDIDYSILEKDLDFESDPMEECLRIFNESTDVKTEDKGRLGKQLSKEEGNE
EKTEDNLTTLFPGQKRRISHLVKQGNAEVPSKPIIRPYRPPTAQEVCYQRIQLAQQQAAQ
LVQKASLSLPGEKRRIAHVPNVALSAAAKQSLVSSKTAVAGRSVAPSNDSEAPTLSLKAC
TLAGMASKTTSTIVPKRVAHVPSLQSATLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLK
FCSSSQEAFDKALSEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPSSTNKTSNKKVV
SHEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLMTEEQLKENGYPMPHPEK
PGRAVLFTAEEKKTSDSSCRICCRCGTEYMVSASGNCIRKEECVHHWGRLRKQRVPGGWE
THYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTK
QGLELTRVTVINSDLKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLN
MFSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQD
NVEGHDSSEDARACMELMVWKIKEDAKVKR
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggctacttccgcggcatcgactgccccttcctcaacgccgggggg
ccgggcgggggcccgccctgccgccggccctactgccacttccggcaccccccggtggcg
gcggcggcggcggcggcggcggcggcgcggtgcggagtctccggcggccacggcgcagag
cggggctatgatccctacaatccagagcttccaaggccctcgctggaggcggaggatggc
gctctggctgacattacggatgtgacacctggtattctggagctggaactggtcaacaag
gccattgaagcagtcaaaaacgaagttgagagagagcagaaaaagtatgaggagctgcta
gaaacgacaaaggagctcagtgcttcagaggcctcctcgctcatttcaaatacacccgtg
tcagctgctgggacgcaaaatgattcattgacctccttagaatataatccaggtagctac
aactttaataataactcagactacaaccctactcctctcgctgctgctagccagtcaagt
aaatacactttagatagttcccgatgtaaaggtagctcgctggaatatgtccccaaggct
atagtacagaataaaaaatacagcagcactgtcactaacaataaatatgtgattgatgac
tctaagccttctacagacttggaatatgacccgctttcaaattactcagccaggcttttg
agcaaagccacaacaaaggagcccaaggggtctaaaaggggtagggtctctagttatgag
gaatcttattctccatcgcgaaagaagctctgtgaagtacccgatgactatgaagccagg
ttctcgtcctctgaagatgagaccgatgcggattataagacaacttctgttagttcacaa
tcaaaagctggttctgaaagtgaatcaagtgacaggttatccaacaaagagcagagcacc
aaactggatgactttgcttcctgggatagcaaagaagcagcagcgcaatatggcacggag
gaccttacaagttcgcagaaaaatcttgccaaaaacttaccagacaagaatgcaaaagca
gcaaaattgtgttctggtaagaatgaccgggaaattgaaaataaaaacaaagactcaaaa
gacaaaacaaaaaggaagaagtcagatgttagtaaaacacctggcctcagtgaggttggc
aagaaggagaaaagtaaaaatacagaaaaagacaaagggctcaagaaagaagaaaaatta
aaaactaagaatgatgagaaaaactgtaaagataaaagtgtcaaagtaaaaactgatggg
aattcaaagaaacctgaaaaacaaaagtcagaaaaagtagatgggcttaaaaaagaaaaa
tccaagtcctccagcagtagttcagggaaaagcaagagtgaggatgccatcaaaggctct
agtacagagaagctggggagcagcaagaaagactccaaactaaaagcaactgacttgaaa
aatggtaaggaaagctctggtcgtaaaaacaaagagaaagggaccaagactccagcactg
gaacgcaagaaagaaaaggtcagttctactgaaaaaggagatccaaagaagagtcggaag
cagcggagtttgagtcacgttgacctgtttggcgatgagagtggggatgatgatgacaaa
agccggcctttggcatccacgtttcttgacgtgagctcgaattcagacggtgatgactgt
ggttcagactctgagagtgaaaatgaagggacaaagaaagtgaagcgctctaagttgtca
aagtcgtcatcgtcttcctcaacatctgatgacattgattattccatccttgagaaagac
ttggactttgagtcagacccaatggaagagtgtctcaggatttttaatgaatctacagat
gtgaaaactgaagacaagggaaggctggggaaacagctatccaaagaggaaggaaatgaa
gaaaagacagaagataatctaactaccttgtttcctggccagaaaagaaggatctctcat
cttgtcaaacaaggaaatgcggaggtcccgagcaagcccataatccggccgtaccgtccc
cccaccgctcaggaggtctgttaccagaggatccagctggctcagcagcaggcggcacag
ctggttcaaaaggcctctctttctttgccaggagaaaagaggaggattgctcatgtgcca
aacgtagccctttccgcagcagccaaacaaagcctggtgagtagtaagacagcggttgct
ggcaggagcgtcgcaccttccaatgactctgaagcacccaccctgtctctgaaggcttgc
accttagctgggatggcttcgaagaccaccagcaccatcgtgccgaaaagggtagcgcat
gttccctccttacagagcgccaccttacagaggcctgttattcccacagaatttggtgct
aaagtcccaacaaacattcgtcaaagatatctcaacctcttcattgatgagtgcctgaaa
ttctgctcctcctcccaggaagcatttgacaaggctctgtcagaagagaaggtggcttat
gaacgtagcaccagtcgcaacatctacctgaatgtggcagtgaacaccttaaagaagctc
cgaagcctagtgcccaattccccgtccagtacgaacaagacaagtaacaagaaagtggtg
tcccatgaagctgttctgggagggaagcttgctgctaagacaagctttactctaaaccgg
tcagggagcttgagagcagaggatttaacaggagccgccttgtaccggcgactgaaggag
tatctcatgactgaggagcagctgaaggaaaatggttacccaatgcctcacccggagaag
cctggtcgcgctgtcctcttcactgcagaggagaagaaaacatctgactcctcctgccgg
atttgttgtcgctgtggcacggagtacatggtctcggcctctggaaactgcattcgcaaa
gaggagtgtgtccatcactggggaaggctacgcaagcagagagtgccaggtggatgggaa
actcattacagctgctgctcaggagctgtgggttcaccaggctgccaggttgctaaacaa
catgtccatgatgggcgaaaggagagccttgatggttttgtgaagacttttgagaagctg
cctacgactgatggctaccctggaatctacgcgttagactgtgaaatgtgctacaccaag
caaggactggagctgacaagagtaacggtgatcaattctgacctgaaagtggtatacgac
accttcgtcaaaccagactccaaggtggtggactataacaccagattctcaggtgtgaca
gaagaggacctggagaacactagtatcaccctgcgggatgtccaagctgtcctactgaac
atgttcagtgcagataccatattgataggccacagcttggaaagtgacttatttgcacta
aagcttatccatggcacagtggtggatactgcgatcgtctttccccaccggctgggtttg
ccttacaaacgggctctccggacgctgatggcagactacctcaagcgcatcatccaggac
aacgtggaagggcacgactccagtgaggatgccagagcttgcatggagctgatggtctgg
aagatcaaagaagatgctaaagtgaaacgatga
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