Chroicocephalus ridibundus (black-headed gull): 134526472
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Entry
134526472 CDS
T10910
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03018
RNA degradation
crid03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134526472 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
134526472 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134526472 (LSM7)
03041 Spliceosome [BR:
crid03041
]
134526472 (LSM7)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134526472 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
134526472 (LSM7)
Spliceosome [BR:
crid03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134526472 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
134526472
NCBI-ProteinID:
XP_063214460
LinkDB
All DBs
Position
22:complement(6124021..6127922)
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AA seq
119 aa
AA seq
DB search
MASGGGGGGGGGGAGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLL
NLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggcggcggcggcggtggtggcggcggcggcgccggcaagatggcggacaag
gagaagaagaagaaggagagcattttggatctctccaaatacatcgacaaaacgatccgg
gtgaagttccagggcggcagagaagcaagtggtgtcttgaaaggatttgaccctcttctg
aaccttgtgcttgatggtaccattgaatatatgcgagatccagatgatcaatacaaatta
acagaagacacacgtcagctgggacttgtggtctgcagggggacttctgtggttcttata
tgtccgcaggatggaatggaagctattccaaaccctttcattcagcagcaagatggctaa
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integrated database retrieval system
