KEGG   Chroicocephalus ridibundus (black-headed gull): 134526475
Entry
134526475         CDS       T10910                                 
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:crid00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:crid04990]
    134526475 (NWD1)
Domain-containing proteins not elsewhere classified [BR:crid04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   134526475 (NWD1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd NACHT WD40_CDC20-Fz AAA_16 EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 NPHP3_N Beta-prop_EML WD40_MABP1-WDR62_2nd AAA_22 nSTAND1 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st AAA RNA_helicase ATPase_2 RuvB_N DAP3 Beta-prop_RIG_1st Rad17 AAA_5 Beta-prop_DCAF4 AAA_25 ResIII AAA_19 Beta-prop_IFT140_1st nSTAND3 AAA_11 AAA_30 Spore_III_AA
Other DBs
NCBI-GeneID: 134526475
NCBI-ProteinID: XP_063214464
LinkDB
Position
22:2016593..2026377
AA seq 1200 aa
MPDLFCLLQGLLGDHCGHQPAPRLIAEKEFEALTLQLPGDSAQLLTQWYQRDENTLPACY
VLQPAAGQAWHRLEGRLASALCLAALKAERCGLLDPEQRHHYHKSVIEWEIEQGLLNTWQ
SNPGAFVFLREVEDPNTQTGQGTTSELLEKEDNLDSEAKQLPSNLKAKMASRYPEHPKVH
TLACSKDSGNPQCKENNKYLKQLCEQFTAVANHQVLENLRYXGQISEEPGRLLQELSHHA
ALCLKNCRFFCGRQNLLDNIFHSVRQNNDKTHTTLILYGPPGCGKTAVMCKLSEQVQAGL
GQDSVVVIRLMGTSQLSSAIRSLLRDIXLQACLAFDLPPPPTQTKQACSDLVSFLSKLLL
TVSHCGTRTLVMFLDSLERLLPGDGAHRFHWLPTDCPPXVHIVISVSTGEPDTLKALQHA
VPEAEAYFEVGPLSSEEGEEMLETLLASDRXRLSPAQQAYFHQSFPSGGQALLFKLASHE
ARKWASYTSPSELAIASTARDATHRLCERLEKSHGTVLVAYVLGYTASSRNGLSDMELKD
ILSLDDEALSEIHHCHLPSSKTILRLPPLHWARLCSDLGERLAERKADGFTLLCVAHRQF
VEMVQNRYLSKQDQIKRHFLLADFFKGTWSWGMKKPRTLPHLSRTLNADRKVAPQPLWFS
DTVPNLRKLSELPFHLLDAGRIEELNQDVLGNMNWISCKIIASGIEXVVDDFAMCTECIP
CPELRLVQETLLLLKPALSSVRSPGVSIIYTEMLARLLSFVPSYPEVIGKLCQQCLSRCS
VCPYPVLIPLCGFLQPPGGPLHTMLTGFLEGVTVMALSSDHRLLVAGSQDGSMFVWNMEV
LEMLRVLPGHSAEVRCVKVFGKGTSAVSAAMGHSLRIWNLISGRARFIIRDTHIEEPPSH
HLHVDEGHMIVYSSSDTKVNAWHLETAELIFQISGEASDAWMFSAVFGPQLVIMTVSEGG
TLSLWNSNTGELRSKRQLSGLQEETPTSSVLIQKQGKTIVGFSRGSLSMVWSLAEQGLLT
DTLDAMGAPVMLLALCDCTLHNNLILTIHFHPTSLLKGICCACFSKDEKYVYTGSLDQAI
TVRDVASGALLAVQCIYTTALRIVPTADGFVATTKAGCVIREQFHCPKTTPPRYNPLQNM
VATCTVKSRKKDKENSRKQQYNQGNSSYLRITTLNVAENALAAVIESGDTLAQHDGCHAP
NT seq 3603 nt   +upstreamnt  +downstreamnt
atgccagaccttttttgcctgttgcagggactcctgggggaccactgtgggcaccagccc
gcgcctcggctcattgccgagaaggaatttgaggccctaactctgcagctgcccggggac
tctgcccagctcctgacacagtggtaccagcgggatgagaacacgttgcccgcctgctac
gtgctgcagccggctgccgggcaggcctggcatcgcctggagggacgcctggcatcagcg
ctgtgcctggccgccctgaaggcagagaggtgcgggctgctggacccggagcagaggcac
cactatcacaaatcagtgattgaatgggagattgaacagggtctcctcaatacctggcag
agcaacccaggggctttcgtattcctcagagaggttgaggatcccaacacacaaactgga
caagggacaaccagtgagctgttagaaaaagaggacaatctggacagtgaagcaaaacag
ctgcccagcaaccttaaagcaaaaatggcaagccgttatcccgaacaccccaaagtacac
acactagcatgcagtaaagactccgggaaccctcagtgcaaggagaataataaatacctg
aaacaactttgtgagcagttcactgctgtcgctaatcaccaggttttagagaatcttcga
tattgaggacagatcagtgaggagccagggcgacttctgcaggagctgagccaccacgca
gctctgtgcctgaagaactgcagatttttctgtgggagacagaatttactggataacatt
tttcactctgttaggcagaacaatgataaaacccacacaaccctcatcctttatgggcca
cctggctgtggaaaaacagctgtgatgtgcaaactctctgagcaggtgcaagctggttta
gggcaagacagcgtagttgtgattcgtttgatggggacatcccagctcagttctgccatt
cgcagcctgctgagggacatttgactccaagcgtgtttagcattcgatttgccaccgcct
ccaacccagactaaacaagcttgcagtgatttggtctcgttcctcagtaaactcctcctc
accgtctcccactgtggcacacggacactggtgatgttcctggactctctggagagattg
cttcctggggatggtgctcacagattccactggctccctacagattgccctccanaagtc
cacattgtcatttccgtttccacaggagagcctgatactctgaaagctctccaacatgct
gtgcctgaggctgaagcgtacttcgaagtaggacccctatccagtgaggaaggtgaggag
atgctagagacgctcttagcgtcagacagatgacggctaagcccagctcaacaggcctat
ttccatcagagtttccctagtggcggtcaagccctgctcttcaagctggcctcccatgag
gccagaaaatgggcatcttacacttcaccttcagaactagcgattgctagcacagcccgg
gacgccactcaccgtctgtgcgagagactggaaaagtcacacggcacagtccttgtggct
tacgtgcttggctatactgcttcctcacgaaatgggctgtcagacatggagctgaaggac
attttatcccttgacgatgaagctctctcagagatccaccactgccaccttccttcaagt
aaaactatcctgcgccttcctcctctccactgggcacggctatgcagcgacctgggagag
cgcctggcagaacggaaagcagatggcttcacccttctttgcgttgcacacaggcaattc
gttgaaatggtgcagaatcgttacctgtcaaaacaagaccaaatcaagaggcattttctc
ctggcagatttcttcaaggggacttggagctggggaatgaagaaacctcgtacattgcca
caccttagcaggactttgaatgccgacaggaaggtagcccctcagcccctctggttctcc
gatactgttccaaatctgaggaagttgagtgaattgccatttcatttacttgatgctgga
cgaattgaggagctaaaccaggatgtgctggggaatatgaactggatcagctgtaaaata
attgcctctggaatagagnntgttgttgatgactttgccatgtgtactgaatgcatccct
tgtccagaactacgcctcgtgcaggagacgcttctccttttgaagcctgcactcagcagc
gtacgcagccctggagtgagtataatatacacagaaatgttggccaggcttctttctttc
gtgccttcctacccggaggtaatcgggaagctgtgccagcagtgtctaagccggtgcagc
gtctgtccctatcctgttctcattccactctgcggatttctccagccacctggtgggcct
ctacacaccatgctcaccggattcctcgaaggcgtcacagtgatggcacttagttctgat
caccggctgctggtggcaggttcccaggatggctcaatgtttgtctggaatatggaagtt
cttgagatgctgcgtgtccttcctgggcactccgctgaggtgaggtgtgtgaaagtgttt
ggaaaagggacctctgctgtttcagctgccatgggtcacagtctgcgcatctggaatttg
atttctggcagagcaaggtttattatccgggatacgcatatcgaagaaccgccctcacat
caccttcatgtggatgaggggcacatgattgtatattcttcctcagatactaaggtcaat
gcttggcacctggagacagcagaactcatcttccagatttctggagaggcgtcagacgca
tggatgttttctgcagtatttggcccacagctggtgattatgactgtgtccgaaggagga
acgctgagcctgtggaacagcaacactggcgagctgagatcaaaacgtcagctgtcaggg
ctacaggaagaaacaccaacatccagcgttctgatccagaagcaagggaagacgatagtg
ggatttagtaggggatctctatccatggtgtggagtttagcagagcaggggttgctgact
gacacactggatgccatgggagcaccagtaatgctcttagccctgtgcgactgcactttg
cataacaatctaatcctaaccatccattttcatcccacatccctcctgaaaggcatttgc
tgtgcttgcttctcaaaagatgaaaagtacgtgtacactggatcgctggatcaggccatt
acagtccgggatgttgcaagtggtgccttgctggctgtacagtgtatatacacaactgct
ctcagaattgtgccaactgcagatggatttgtggcaacaacaaaagctggttgtgtaatt
cgtgagcagtttcactgcccaaagaccaccccgcctcggtataacccactccagaacatg
gtggcaacatgtacggtaaaatccagaaagaaagacaaggaaaactcaaggaagcaacag
tacaaccaaggaaattcttcttacctcagaattacaacattaaacgttgctgaaaacgcc
ctcgctgcggttattgagtccggtgataccttggcacaacacgacggctgtcacgcacca
tag

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