Chroicocephalus ridibundus (black-headed gull): 134526647
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Entry
134526647 CDS
T10910
Symbol
USP39
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134526647 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crid03041
]
134526647 (USP39)
Spliceosome [BR:
crid03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
134526647 (USP39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
134526647
NCBI-ProteinID:
XP_063214795
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All DBs
Position
23
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AA seq
591 aa
AA seq
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MSSRGKREREARAAPRGSGGGGGSSSSSSSSRGSSRSRREGEAERSRGRREAERERGRRE
AAEPGLALPLPVDPARIKREPGTGSWGGSATSAGPVRVKREREPDGDSDPEPEPTVRYGR
FDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYI
HSVQFSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQQITNLDKQAKLSRA
YDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYKSIQRPPGDIMFLLV
QRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHSAL
GGTKKKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNSEYQEMMVESTFMYLTLD
LPTAPLYKDEKEQLIIPQVPLFSILAKFNGATEKEYKTYKENFLKRFQLTKLPPYLIFCI
KRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAAHTNTTYDLIANIVHDGKPSEGSY
RIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETNQQGA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgcgggaaacgggagcgggaggcccgggcggccccgcggggctccggcggc
ggcggaggctcctcctcctcttcctcctcgtcgcggggctcgtcgcggagccgccgggag
ggggaggcggagcggtcccgagggcgacgggaggcggagcgggagcgcgggcggcgggag
gcggcggagccgggcctggccctgccactgcccgtggatcccgcacgtatcaagcgggag
cccggcaccggctcctgggggggctccgccacctctgccggcccggtgcgggtcaagcgg
gagcgtgagcctgatggcgactcggatcctgagcccgagcctaccgtgcgctatggccgt
tttgaccccgaggaccagcgtagccgccactgtccctacctggacaccatcaacaagagc
gtcctggatttcgatttcgagaagctgtgctccatctcgctgtcccacatcaacgtctac
gcctgcctcgtctgcgggaagtacttccagggccgcgggctgaagtctcacgcctacatc
cacagcgtccagttcagccaccacgtcttcctcaacctccacacgctcaagttttactgc
ctccccgacaactacgagatcattgactcctcgctggaggacatcacgtatgtgctgaag
cccacgttcaccgctcagcagatcaccaacctggacaagcaggccaagctctcccgtgcc
tacgacggcaccacgtacctgcccggcatcgtggggctcaacaacatcaaagccaacgac
tatgccaacgccgtcctccaggctttatccaacgtcccgccgttgaggaattattttttg
gaggaagagaactacaagagcatccagcgcccgccgggggacatcatgttcctgctggtg
cagcgcttcggggagctgatgcggaagctgtggaacccccggaacttcaaagcgcacgtc
tcgccccacgagatgctgcaagccgtggtcctctgcagcaagaagaacttccagatcacc
aagcaaggggacggggtggacttcctctcctggttcctgaacgcgctgcactcggcgctg
ggtggcacgaagaagaagaagaagaccattgtcaccgacgtcttccagggctccatgcgt
atcttcaccaaaaagctgcctcacccggatctgccggccgaggagaaggcgcagctcctg
cagaacagcgagtaccaggagatgatggtggaatccaccttcatgtacctgacgttggac
cttcccaccgccccactctacaaggacgagaaggagcagctaatcatcccccaggtccct
ctcttcagcatcttggccaagttcaacggcgccaccgagaaggagtacaaaacctacaag
gagaacttcctaaagcgcttccagctcaccaagctgcctccttacctcattttctgtatc
aagcgcttcaccaagaacaacttctttgtggagaagaaccccaccatcgttaacttcccc
atcacgaacgtggacctgcgggagtacctgtcggaggaggtgcaggcggcgcacaccaac
accacctacgacctcatcgccaacatcgtgcatgatgggaaaccctccgagggctcttac
cgcatccacgtgctgcaccacggcaccgggaagtggtacgagctgcaggacctgcaggtg
acggacatcttgccgcagatgatcaccctctcagaggcgtacatccagatctggaagcgg
cgcgaggaggacgagacgaaccaacaaggtgcctga
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