Chroicocephalus ridibundus (black-headed gull): 134526656
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Entry
134526656 CDS
T10910
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134526656 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134526656 (RAB11FIP1)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
134526656 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
134526656
NCBI-ProteinID:
XP_063214814
LinkDB
All DBs
Position
23:complement(6030867..6045844)
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AA seq
1411 aa
AA seq
DB search
MSGPGPAPAWAPTHVQVTVLRARGLRAKAAAGGGGSDAYTVMALGRDKFSTSVAERCQGQ
PVWREEATFELPPPPRPAALRLTVLHRALVGLDKFLGRAEVDLAALRADGGRRHCRWYKL
RSKPGKKEKERGEIEVDIQFMRSNMTASMFDLSVKDKSRSPFGKLKDKLKGKRSSGLSDT
ASVIIPSTTHSPADSEDESVEKEKEKKKSKFKALFSKPGLQKTSLSQSMSVLPTQPVTER
VRLRPSDFQSQWDDEESDASPTSERAFGNALEEKSSPSLVFKSRKTATLDSRQLNQVTTS
HTKKEGLSLFSGLKSKSDPVSKSSLCINGSHVYMEESTTKDNTPASSPSPHNFRRKQLFA
SEENLSSRSAKVPEETGRTSPSHAFSGSASLETFKSMTLPSYKLLSSEEYLETSVPPTVE
VIKETKKTDHKKSALLSLVTGKKEAVKTSDAENIPDRTLLEEENKVPEEKSEQETKHFEL
PADLSRGDPSGDRRRAEDVFANKQPLNPFEEEPKPEKAAAPAKTKAVKPRLGVPSEEKTK
ATLPTLAPDSLPAFLSVHPISSDNNPFVSKMGQNVRVADSENITSSPASITSPAFAAELL
HGKNPFTSEWGRASAALGSEGIARLPSPHPLAASVPKTPLSGQVSGSGNNPFASEWCQGP
RSSDAQASRGLFCPHAPSLPSDCHFNNNNPFVSKLGWEAGAPGFIAVASSSFCLPCDEDC
SSAEHPAELQYSGRGASGSSSDVALTSNVKAVSKPLGTLSDSPGLAPKKQHDSPQPQVET
SLKRSKLGYGKSVSFLLSESEGATSGDEDLDGQEREKQCSDFSEMVLTGSDATGERAGFA
HELEAGCYPSSERSSDSVGPIRHGETTVQGGEEVGTINTEACTKGSKHFASPSECNNSLF
PENGPEQPPSPESELKETQIFGEKRQEERAPTLEPQVTPLDKNDSFSQIGSARPTSGACA
LSPGEGDVGRAGSEVLVTPKPAPRLSLTRKKCPLVSQADELSGDVPSSGDGVKSAPGLPL
HVDKASDAHGCFPQSGSLETVTPPAVIRDDSTNRHLKNEGDNDLFDCLTTLKSAVPVTGD
RGLKLASLPVIPEGGSDDELLGDCQENHGVAAGDKNISETAKQSLDLMPLHEELSEHSAS
SAAAQVTPAAPGGGGGGGSTPGACKPSKPRVPPARVDVHSVNNWVADSGLGMTSHSRERS
SHFEKQELKISAGVEECAECDFFEPSVSSSSLSSPSQPYSSSPSLPSDTPSHRAESPKKP
TAEGFADKAGNSGKKKLLQAWVSPSETYPNQTQQSGETVSPKHRLHPVKPMNATANKSQS
QNLNVISTMNEKLLEMNVKKYDPSDPAYAYAQLTHDELIQLVLKQKDAITKKDLQVRELE
DYIDNLLVRVMEETPNILRVSMSGNKKAGKM
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccgggcccggcgccggcctgggcgcccacccacgtacaggtgacggtgctg
cgggcgcgggggctgcgggccaaggcggcggcgggcggcggcggcagcgacgcctacacc
gtgatggcgctgggccgcgacaagttctccacctcggtggcggagcggtgccaggggcag
ccggtctggcgggaggaggccaccttcgagctgccgccgccgccgcgacccgccgccctc
cgcctcaccgtgctgcaccgcgccctcgtcggcctcgacaagttcctgggacgcgccgag
gtggatctggcggcgctgagggccgacggcggccgccggcactgcaggtggtacaagctt
cgctccaaaccagggaaaaaagaaaaggagagaggggagatcgaagtggatatccagttt
atgaggagcaacatgacagccagtatgtttgatttgtccgtgaaagacaagtctcgctct
ccctttggcaagctcaaagacaagctcaaggggaagaggagcagtggcctttccgacacg
gcgtcggtgatcattcccagcacgactcactcccccgctgacagcgaagatgagtcagtt
gagaaggagaaggaaaagaagaaatcaaagttcaaagccctgttttccaaacctggcctg
cagaagacgtccctctcccagtccatgtcagtcctgccaacgcagcccgtcaccgagagg
gttcggctgcggcccagcgacttccagtcacaatgggacgatgaagagtcagacgcctct
ccaacctcagaaagagcctttggaaatgccctggaagagaagtcctctccttctcttgta
tttaagtctcgtaaaacagcaactttggacagcaggcaactaaaccaagtaaccactagc
cacaccaagaaagaagggctctctttgttcagtggccttaaatccaaaagcgatcctgtt
tccaagtccagtctgtgtatcaacggcagtcacgtttatatggaagagagcacgacgaag
gacaacactccagcctcttccccctctcctcacaacttcaggaggaagcagctctttgct
tcagaagagaacctgtcttccagatctgctaaagttcctgaagagacgggaagaacatct
cctagtcatgctttctctgggtctgcgtctttggagacctttaaatctatgactttgcca
tcgtacaaattgcttagcagtgaagaatacctggaaaccagcgttcctccaactgttgag
gttattaaagagacgaaaaaaacggaccacaaaaagtctgccttgctctccctggtcaca
gggaagaaggaagcagtgaagaccagtgatgctgagaacattcccgacaggaccctgctg
gaagaggaaaacaaagttccagaagagaagagtgaacaagagaccaaacactttgaactt
ccagcagatttaagcagaggggatccttcaggagacagacgccgtgcagaagacgtcttt
gcaaataagcaaccgctcaaccctttcgaggaagaaccgaaacctgaaaaagctgctgcg
ccagcaaagaccaaagccgtgaagcccagactgggcgtgccttcagaggagaaaaccaaa
gccacgcttcctactcttgcacctgattcccttcctgcttttctttctgtacaccctatc
agtagtgacaataatccttttgtttctaaaatggggcaaaatgtccgagtggcagactct
gaaaacattactagttctcctgcatctattacttctcctgcttttgctgcagagctttta
catggcaagaacccctttacttctgagtggggcagggcatccgcagccctgggttctgaa
ggcattgcccgtctcccttcaccccatccgcttgcagcctctgttcccaaaacgcctctt
tctgggcaggtctctggcagtggtaataatccttttgcttccgaatggtgccaaggtcct
agaagctctgatgcgcaggcttctcggggtctcttttgcccacacgcaccttctctcccc
tctgattgtcattttaataacaataatccctttgtatccaagcttgggtgggaagcgggt
gcgccaggtttcatagctgttgctagttcttctttctgccttccttgtgatgaagactgt
tcctcagcagagcaccctgctgagctgcaatactctggtcgcggtgcttcagggagttct
tcagatgtggctttaactagtaatgtcaaagctgtatcaaagcctctcggcaccctttct
gacagccctggtctggctccaaagaagcaacacgattctccccagcctcaggttgagact
tctttgaaaagaagcaagttaggctacgggaaatctgtgtcctttctcctcagtgaatcg
gagggtgctacatcaggtgatgaggatttggatgggcaggaacgcgaaaagcagtgctct
gatttcagtgaaatggtattgacgggttcagatgcaaccggagagcgagcagggtttgct
cacgaactggaagcggggtgctacccatcatcagagcgctctagtgacagcgtaggtccc
atccggcatggcgagaccactgttcagggtggtgaggaagtaggtactataaatactgaa
gcctgcacaaagggcagcaaacactttgcatctccctcggagtgtaataatagccttttc
ccagagaatgggcctgagcagccaccttcccccgagagtgagctgaaagagacgcagatc
tttggtgaaaagagacaggaagaacgtgcacccacgttagaaccccaggtgactccactt
gataaaaatgactcattttctcaaataggatctgccagaccaacctcgggagcttgtgca
ctgtcccctggggaaggcgatgtagggagggctggcagtgaggtgttagtcactcccaag
ccagcaccacggctctctttaacgcggaagaagtgcccactggtttctcaggctgatgag
ttaagtggtgatgtgccttcttcaggtgacggtgtaaaatctgcgcccgggctcccatta
cacgttgataaagcctcagatgctcatgggtgtttcccccagagcggctcgttagagact
gtcactccaccagcggtgatcagagatgacagcactaataggcatttaaaaaatgaaggt
gacaatgatttatttgactgtcttacaactctaaagtctgccgttcctgttaccggagac
cgtggtttgaaactggccagtcttccagttattccggagggaggctcggatgacgagctg
ctgggtgactgccaggagaaccacggcgtcgctgcaggtgataaaaacatttcagagact
gcaaagcagtccctggatttaatgcctttgcatgaagaactgtcagagcactctgctagc
tctgctgcagcccaagtaaccccggctgctccgggaggaggaggaggtggaggaagtact
cctggtgcttgcaagccaagcaaaccacgcgtgccgcctgccagagtggatgttcacagt
gtcaataactgggtagctgactcaggcttaggtatgacatctcattccagggagcgtagt
agtcattttgagaaacaagaactgaaaataagtgcaggtgttgaggagtgtgcagagtgc
gacttctttgagccttctgtttcctcttcctccctgtcaagtccttcccagccctactct
tcctctccttctctcccctctgacaccccaagtcatagagcagagtctccgaaaaagcca
acagccgagggcttcgcagataaagcaggaaattctggcaagaagaagcttcttcaggca
tgggtttcaccctctgaaacatatcctaaccaaactcagcagagtggtgaaaccgtgtct
cctaagcacagactccatcctgtgaagccaatgaatgccacagcaaacaagtctcagagt
caaaacctgaatgtcatcagcaccatgaatgaaaagctgctggagatgaacgtgaagaaa
tatgatccttcagatcctgcctatgcttatgctcagctaacacacgatgagctgatccag
ctggtcctgaaacagaaggatgcaattaccaagaaagatctccaggtgcgggagcttgag
gactacatcgataacttgcttgtcagagtcatggaggaaaccccaaacattcttcgggtt
tcgatgtctggaaacaaaaaagccgggaagatgtaa
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