Chroicocephalus ridibundus (black-headed gull): 134526759
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Entry
134526759 CDS
T10910
Symbol
ITGA5
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5
KO
K06484
integrin alpha 5
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03266
Virion - Herpesvirus
crid04145
Phagocytosis
crid04510
Focal adhesion
crid04512
ECM-receptor interaction
crid04517
IgSF CAM signaling
crid04518
Integrin signaling
crid04810
Regulation of actin cytoskeleton
crid04820
Cytoskeleton in muscle cells
crid05100
Bacterial invasion of epithelial cells
crid05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
134526759 (ITGA5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134526759 (ITGA5)
04517 IgSF CAM signaling
134526759 (ITGA5)
04518 Integrin signaling
134526759 (ITGA5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
134526759 (ITGA5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134526759 (ITGA5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134526759 (ITGA5)
04810 Regulation of actin cytoskeleton
134526759 (ITGA5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134526759 (ITGA5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134526759 (ITGA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crid04147
]
134526759 (ITGA5)
04515 Cell adhesion molecules [BR:
crid04515
]
134526759 (ITGA5)
04090 CD molecules [BR:
crid04090
]
134526759 (ITGA5)
Exosome [BR:
crid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134526759 (ITGA5)
Cell adhesion molecules [BR:
crid04515
]
Integrins
Integrin alpha subunits
134526759 (ITGA5)
CD molecules [BR:
crid04090
]
Proteins
134526759 (ITGA5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
134526759
NCBI-ProteinID:
XP_063215008
LinkDB
All DBs
Position
24:complement(2479294..2507106)
Genome browser
AA seq
1256 aa
AA seq
DB search
MSQCSRGVPAPGVPLPQECPSVAGCHSPWCPAPPGISRCPRDVPVPGVPLPPGCPAPPGM
SHSPWDVPMPRGCPGPWCPAPRGMSRCPRLPRPAAVRCRCRCPAGLWLLPGESRRGGAGR
APRALSEGTREREAAPSPASPAPPWPRPRPPPRRPRPRPLLPPLLLLLLLPLLPPLPVAA
FNLEESRPVTFRGAPGSLFGFALDFYLPRPRSVSILVGAPKANTSQPNVTQGGAVYHCPW
PPGDECTPIDFDHIGTRTHDFGGNNTETPDPVEFKSLQWFGATVRAHNASILACAPLYSW
SPPKEEGGGREPVGTCFLSIGNFSKFVEYAPCRSDLNSAAGQGYCXGGFSAEFTQTGRVL
LGGPGSYFWQGQVMSATQEQIAASSYPEYFIQEVAGQLQTRQAAPTHDDSYMGYSVAVGE
FSGDTTQDFVAGVPKGNLTYGYVTILNGTNMKSLYNFSGEQMAAYFGYAVAATDVNNDGL
ADLLVGAPLFMARSGGGRVQEVGRVYLYLQQRRGGGNLPDPPPAMAPAPAMALTGPQEFG
RFGSAIAPLGDLDLDGYNDVAVGAPLGAEGRRGRVYVYSGGGAGLHPQPAQVLRGTGRPG
RHPDFFGAALRGATDLDGNGYPDLLVGAFGVDTAVVYRGRPIVHASAALSVFPTMFNPEE
RGCVLEATGLHVPCINVSFCLNASGRHVPGPIGFAVELSVDGAKAGGGRRALFLPGGQPT
RTLTLPVPNGGGTRCRTMAVFLRNESEFRDKLSPIALGLSFALDPRAPPDAHGLHPVLDA
RTRTRLEAKAHIQLDCGEDNVCVPDLQLEAAVDRRAVYLGDRNSLNLTFNARNQGEGGAY
EAELHVRPPPHAQYTGVLRPHGNFSALSCELGGGNASSPLVCDLGNPMKAGASIWGGLRF
TIPHLSDSSKSIRFELQIRSKNANNSQSEVVTVPLEVRAATRLSAFGVSRPDVVTVPEGG
WTSQRPPQRLEDLGPPVEHVYEVVNEGPSAISHGTLELSCPLIYRGHTLLYITGHSGPRN
CSASHPLDSLHLAEQEQSPETHVLQRRDAGDTRDARDTRGSGPPRAPPTSWSVPTCPRVP
PSVPTSLLSLSHVLPRGSPVARPPPPPRLLSPLLCQGCPEAECFRLSCPMGGLEKQQRVS
LRLAFHLWAPPPRQREARAQALRCEAEYRVLRLPYRVRPQHYPSQRLQVVTGLQWARAEG
SAGVPVWVVVLAVLLGLLLLALLCYGLYKLGFFKRAGPYGTAMEKAQLKPQAASEA
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtgctccaggggtgtcccggcccctggtgtcccactcccccaggagtgtccc
agtgtcgcggggtgtcacagtccttggtgtcctgctccccccgggatatcccggtgcccc
cgggatgtcccagtccccggtgtcccgctccccccgggatgtcctgctccccctgggatg
tcccactccccctgggatgtcccgatgccccgggggtgtcccggcccctggtgtcccgct
ccccgcgggatgtcccggtgcccccggctcccccgtcccgccgcggtgcggtgccggtgc
cggtgcccggcggggctctggctcctccccggtgagtcacggcggggcggagcgggccgg
gccccccgggcactttccgaggggactcgggagcgggaggcagcgccgagcccggccagc
cccgctccgccatggccccggccgcggccccccccgcgccgcccccggccccggccgctg
ctgccgccgctgctgctgctgctgctgctgccgctgctgccgccgctgcccgtcgctgcc
ttcaacctggaggagtcgcggcccgtcacctttcgtggggcccccgggtccctcttcggc
ttcgcgttggacttttacctgccccggccccgcagcgtcagcatcctggtgggtgccccc
aaggccaacacgagccagcccaatgtcacccaggggggggccgtctaccactgcccctgg
ccccccggtgacgaatgcacccccatcgacttcgaccacatcgggacccgcacccacgac
ttcgggggcaacaacacggagacccccgaccccgtcgagttcaagtccctgcagtggttc
ggggccaccgtgcgggcgcacaacgcctccatcctggcctgcgccccgctgtacagctgg
agcccccccaaggaggagggggggggccgggagccggtgggcacctgcttcctctccatc
ggcaacttctccaagttcgtggaatacgcgccgtgccgctcagacctgaactccgcggcc
gggcagggctactgcncagggggcttcagcgccgagttcacccagacgggacgggtgctg
ctgggggggcccggcagctacttctggcaagggcaggtgatgtcggcgacgcaggagcag
atcgcggcctccagctaccccgagtacttcatccaggaggtggccgggcagctccagacg
cgccaggcggcccccacccacgacgacagctacatgggctactcggtggcggtcggcgag
ttcagcggggacacgacgcaagacttcgtggctggtgtccccaagggcaacctcacctac
ggctacgtcaccatcctcaatggcaccaacatgaagtccctgtacaacttctcgggggag
cagatggcggcctatttcggctacgccgtggcagccaccgacgtgaacaatgatggactg
gccgacctgctggtgggggcccccctcttcatggcgcggagcgggggggggcgggtgcag
gaggtgggcagggtgtacctgtacctgcagcagcggcgggggggggggaacctgcccgac
cccccccccgccatggcacccgcccccgccatggccctcaccgggccccaggagttcggg
cgcttcggcagcgccatcgcccccctgggagacctggacctggacggctacaacgacgtg
gcggtgggggccccgctgggcgccgaggggcggcgggggcgggtgtacgtctacagcggg
gggggggccgggctgcacccccaacccgcccaggtgctgcggggcactgggcggcccggc
cgccaccccgacttcttcggagccgccctgcgcggggccaccgacctggacggcaacggc
tacccggacctcctggtgggcgccttcggggtggacacggccgtggtgtacaggggccgc
cccatcgtccacgccagcgccgcgctcagcgtcttccccaccatgttcaaccccgaggaa
cgcggctgcgtcctggaggccaccggcctccacgtcccctgcatcaacgtcagcttctgc
ctcaacgcctcggggcggcacgtacctggccccatcggctttgcggtggagctgagcgtg
gacggggcgaaagccgggggggggcgtcgggcgctcttcctgccgggggggcagcccacc
cgcaccctcacgctgcccgtccccaacggggggggcacccgctgccgcaccatggccgtc
ttcctgcggaacgagtcggagtttcgggacaagctgtcacccatcgccctggggttgagc
ttcgccctggacccccgcgccccccccgacgcccacgggctgcacccggtgctggacgcc
cggacgcgcacccggctggaggccaaggctcacatccagctggactgcggggaggacaac
gtctgcgtgcccgacctgcagctggaggcggccgtggaccgccgcgccgtctacctgggg
gaccgcaacagcctgaacctgaccttcaacgcccgcaaccagggcgaggggggggcctac
gaggccgagctgcacgtgcggccccccccccacgcccagtacaccggggtgctgcgccca
cacgggaacttctctgcgctgagctgtgagctgggggggggcaacgcctccagccccctc
gtctgcgacctgggcaaccctatgaaggcgggcgccagcatctggggggggctgcgcttc
accatcccccacctcagcgacagcagcaagagcatccgcttcgagctgcagatccgcagc
aagaacgccaacaactcgcagagcgaggtggtgacggtgccgctggaggtgcgggcggcc
accaggctctccgccttcggggtgtcgcggcccgacgtggtcaccgtccccgaggggggt
tggacgtcccaacggccgccccagaggctggaggacctggggccacccgtggagcacgtc
tatgaggtggtgaacgagggtcccagcgccatcagccatggcaccctggagctgagctgt
cccctcatctaccggggccacacactcctctacatcaccggccactcgggtccccgcaac
tgctccgccagccaccccctggacagcctgcacctggcggagcaggagcagagcccggag
acacacgtcctgcagcgccgggacgcgggggacacgcgggacgcgagggacacgcggggc
agtggccccccccgcgccccccccacatcctggtcagtgcccacctgtccccgtgtcccc
ccctctgtccccacgtccctgctctccctgtcccacgtcctgccccgtggcagccccgtg
gcacgtccgcccccccccccgcggttactgtccccgctgctgtgccaggggtgtcccgag
gccgaatgcttccggctgagctgccccatgggggggctggagaagcagcagcgggtgagc
ctgcgtctggccttccacctctgggcgccccccccgcgccagcgggaggcgcgggcgcag
gcgctgcgctgtgaggccgagtaccgggtgctgcggctgccgtaccgcgtccggccccag
cactaccccagccagcgcctgcaggtggtgacggggctgcagtgggcgcgcgccgagggc
agcgcgggggtgccggtgtgggtggtggtgctggcggtgctgctggggctgctgctgctc
gccctgctctgctacggcctctacaagctgggcttcttcaagcgcgcggggccctacggc
acggccatggagaaggcgcagctgaagccccaggcggcctcggaggcctga
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