Chroicocephalus ridibundus (black-headed gull): 134526875
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Entry
134526875 CDS
T10910
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134526875 (SMARCC2)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134526875 (SMARCC2)
PBAF complex
134526875 (SMARCC2)
GBAF(ncBAF) complex
134526875 (SMARCC2)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134526875
NCBI-ProteinID:
XP_063215232
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Position
24:complement(3337588..3348075)
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AA seq
1206 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQTSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTEEARAEAQPAEEKKEAKEPRDGAAEEEAKEKPGETPKKEEEKGKEVEGEKEAD
KGDGDGAGEPEKEKEGKEGPDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPPPPPPPVPPLAPAAHPLA
APPAPAMVAPAEPVGQPLPGAPPPQPPPPPGAPAVPHAPAPFPGQQPPSQSLAGSLGGSG
HPAVPGNAPAALPFGLPPSAIPFSMANPPAEPLGATFPANPPALPLHGALASSMPSGGVP
PPAHPPGLALPHLAGGSAAAHSPAIVAAVQGSLLPNPGLLADQGAPLQTDPIAPSPSTAT
PVPPTQ
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctctggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgataaaatgc
ttcttggatttcaaggcggggggagccctgtgccacatcctggcagcggcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatctttctgcaccaggagattgaacccaagctgctgagcaagctgaaagacatcgtc
aagaggcatcagggcacggtgaccgaggacaagagcaacgcgtcccacatcgtctgcccc
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgcgacaagcag
gtcctgctgcactggggctactacccagacagctatgacacctggatccctgccagtgag
attgaggcctccgtggaggacgccccgacgccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactacgaggtgacg
gacgagaagagccctgtcgcccgcaggaagaagatctcggccaaaacgctgacggatgag
gtgaacagccccgactcagaccggcgggacaagaaggggggcaattacaagaagcgaaag
cgctcgccctccccctcgcccaccccagaggccaagaagaagaacgcgaagaagggaccc
tccaccccctacaacaaatccaagcgtgggcaccgtgaggaggagcaggaggacctgacg
aaggacatggacgagccctcgccggtccccaacgtggaggaggtcaccctgcccaagaca
gtcaacaccaagaaggattcggagtctgcgcccgtcaaggggggcaccatgacggacctg
gatgagcaggaggacgagagcatggagacggccggcaaggatgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaatggcaagaataaatccaagacccctgaa
atatacctggcttaccgcaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccaccgcctgccgccgcaacttggccggggacgtctgtgccatcatgcgggtc
cacgctttcctggagcaatggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgccgacctcccacttccacgtcctggccgataccccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaggggaagccggag
ctgcagacctcggcctcgcagcagatgctgaacttccccgacaagagcaaggagaagcca
gccgacatgcagaactttggcctccgcacggacatgtacaccaagaagaacgtcccctcc
aagagcaaagccgccgccagcgccacgcgggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctacctg
gaggactcggaggcgtccctggggccgctggcctaccagcccatccccttcagccagtcc
ggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgcgtcgct
tccgccgccgccaagtcggctctggaggagttctccaagatgaaggaggaggtgcccacg
gccctggtggaggcccacgtccgcaaggtggaggaggcggccaaggtgacgggcaaggcc
gaccctgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccggag
cggatagaggagagcggcacagaggaggcgcgggcggaggcgcagccagccgaggagaag
aaggaggcgaaggagccccgggatggagctgccgaggaggaggcgaaggagaagcccggg
gagacacccaagaaggaggaggagaaggggaaggaggtggagggcgagaaggaggccgac
aagggtgacggtgatggtgcaggggagccggagaaggagaaggaggggaaggagggtccg
gacgaggcgcccaaggagccgccggagcccgaggccgagcgcaaggccaaggtggagcgg
gacatcggcgaggggaacctctccaccgccgccgccgccgccctggctgccgccgccgtc
aaggccaagcatttggcagccgtggaggagcgtaagatcaagtcgctggtggctctgctg
gtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggagctggagacc
atcatggaccgggagcgcgaggctctggagtaccagcggcagcagctgctggcggaccgt
caggccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcacttc
cagcacctccagcagcagcagcagcagcagccgcccccgctgcccccgggggcccaaccc
ctgccgccgccgccgccgccgccggtgccccccctggcccccgccgcccacccgctggcc
gcgccgcccgcccccgccatggtggcccccgccgagcccgtggggcagccgctgcccggg
gcccccccgccgcagccgcccccgccgccgggcgcccccgccgtcccgcacgccccggcg
ccgttccccgggcagcagccgccgtcccagagcctggcggggagcctcggtggcagcggc
caccccgccgtgcccggtaatgcccccgcggccttgcccttcggattgcctccatccgcc
attccatttagcatggctaacccccccgccgaacccctcggcgccaccttccccgctaac
ccgcccgccctcccgctgcatggggccctcgccagcagcatgccgtccgggggggtgccc
ccccccgcccacccacctggcctggccctgccgcacctcgcggggggctcggccgccgcg
cacagccccgccatcgtggccgccgtgcagggaagcctccttcccaaccccggcctgctc
gcagaccaaggcgcccccttgcagacggaccccatcgcgcccagccccagcacggccacc
cccgtcccccccacgcagtga
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