Chroicocephalus ridibundus (black-headed gull): 134526942
Help
Entry
134526942 CDS
T10910
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid00260
Glycine, serine and threonine metabolism
crid00630
Glyoxylate and dicarboxylate metabolism
crid00670
One carbon pool by folate
crid01100
Metabolic pathways
crid01200
Carbon metabolism
crid01230
Biosynthesis of amino acids
crid01240
Biosynthesis of cofactors
crid04981
Folate transport and metabolism
Module
crid_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
134526942 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134526942 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134526942 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134526942 (SHMT2)
Enzymes [BR:
crid01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
134526942 (SHMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Coat_F
Motif
Other DBs
NCBI-GeneID:
134526942
NCBI-ProteinID:
XP_063215356
LinkDB
All DBs
Position
24:704130..708828
Genome browser
AA seq
501 aa
AA seq
DB search
MWPLRLGRALQRCGGLVATGSQRAQHGTAAAAATGHVPSWTGQESLAESDPEMWTLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRA
LEAFDLDPACWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDIKRI
SATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLIIAGTSAYARLIDYARMKKVCEE
VKAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKT
GKETLYDLEDRVNFAVFPSLQGGPHNHAIAAVAVALKQASSPAFRQYCQQVLKNAKAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGMDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFREEDFQKVVAFIDEGIALALDVKSKTSKLQEFKTFLLRDAETQRRLA
DLRQRVETFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcagggccctgcagcgatgtggtggcctggtggccaccggc
agccagcgggcgcagcacggcaccgctgcagcggctgccacggggcacgtgcccagctgg
acggggcaggagagtctggccgagagcgaccccgagatgtggaccctggtgcagaaggag
aaggaccggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggcg
gcactggaagccctgggctcctgcctcaacaacaagtactcggaggggtaccctggcaag
aggtactacgggggggccgaggtggtagaccagatcgagctgctgtgcgagcagcgggct
ctggaggcgtttgacctggatcctgcctgctggggcgtcaacgttcagccctactcgggg
tctccagccaactttgccgcctacacagcgctgctgcagccccacgaccgcctgatgggg
ctggacctgcccgatgggggccacctcacacacgggtacatgtcggacatcaagagaatc
tcggcaacgtccatcttcttcgagtcgatgccctacaaacttgatccagccacggggctg
atcgactacgaccagctggaggtgacggcgcggcttttccgtcctcgtctcatcatcgct
ggcaccagcgcctacgcccgcctcatcgactacgctcgcatgaagaaggtgtgcgaggag
gtgaaggcgtacctgctggcggacatggcgcacatcagtgggctggtggcagccaaggcc
atcccttcgcccttcgagcacgcggatgtggtaaccagcaccacgcacaagaccctgcgt
ggcgccaggtcaggactcatcttctaccgcaaaggcgtgcgctcggtagacaagaagacg
ggcaaggagaccctctacgacctggaggacagggtcaactttgccgtcttcccctccctg
caaggggggccccacaaccatgccatcgctgccgtggctgtggccctcaaacaggccagc
tcgccagctttccgccagtactgccagcaggtgctgaagaacgccaaagccatggcacag
gccctgctgcagcgcgggtacaccctggtgtcaggtggcaccgacaaccacctggtgctg
gtggacctgcggcccaagggcatggacggcgcgcgggctgagcgggtgctggagctcgtc
tccatcactgccaacaagaacacatgcccgggggacaagagcgcgctcacgccagggggg
ctgcgcctgggtgcccccgccctgacttcccgccagttccgcgaggaggatttccagaag
gtggtggctttcatcgacgagggcatcgcgctggccctggacgtcaagagcaaaaccagt
aagctccaggagttcaagaccttcctgctgcgggacgcggagacgcagcgccgcttggcc
gacctgcgccagcgcgtggagaccttcgctcgtgccttccccatgcctggcttcagcgac
cactga
DBGET
integrated database retrieval system
