Corynebacterium riegelii: AK829_02270
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Entry
AK829_02270 CDS
T09801
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
crie
Corynebacterium riegelii
Pathway
crie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AK829_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crie03019
]
AK829_02270
03016 Transfer RNA biogenesis [BR:
crie03016
]
AK829_02270
Enzymes [BR:
crie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AK829_02270
Messenger RNA biogenesis [BR:
crie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AK829_02270
Transfer RNA biogenesis [BR:
crie03016
]
Prokaryotic type
tRNA degradation factors
AK829_02270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
KH_2
RNase_PH_C
OB_cyt-4
KH_KhpA-B
MnmE_helical
Motif
Other DBs
NCBI-ProteinID:
AKV58184
UniProt:
A0A0K1R9V3
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All DBs
Position
479549..481825
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AA seq
758 aa
AA seq
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MFKPKNSFDVFVDEDYGITEAVATIDNGDFGSRTIRFETGQLARQADGSVTTYLDDDTMM
LTTVTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVVVTVLSMDPEEYYDVVAINGSSAATQLSGLPVSGAVGGVRMALIADD
KHPEGQWVAFPNHAQHERALFEMVVAGRIVEKKRGRRTEQDVAIMMVEAGAGANVVKLVK
DGFPAPTEETVAQGLEAAKPYIKTLCEAQTALAKEAAKDAKEFPLFPPYSDKVFEAVEKK
AAKRLSKIMTIAGKQEREEESNAFMEEVEEYLFDKLDIDDDEKDEIAAASKEIRAAYNAL
QKQIVRDKILSEGFRIDGRGVTDIRDLEVEVELIPRAHGSALFERGETQILGVTTLDMLK
MEQHIDSLTPETSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSREE
FPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLAAPVAGIAMGLVSGEVGGKTEYV
ALTDILGAEDAFGDMDFKVAGTREFITALQLDTKLDGIPSDVLASALNQAREARETILDT
MAEVIDQPDEMNELAPKITTVKVPVSKIGEVIGPKGKTINSITEETGADITIEDDGTIYV
SAAQGAAADAAIEKINAIANPQMPKVGERYLGTVVKTVAFGAFVSILPGTDGLIHISNLG
GNTRVENVEDVINVGDKVEVEIRDIDNRGKISLVPVED
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcccaaaaactccttcgatgtttttgtggatgaggactacggcatcactgag
gccgtagccaccattgataacggtgacttcggttcccgcaccatccgttttgaaaccggc
cagctggcacgccaggcagacgggtctgtgaccacgtacctggatgatgacacgatgatg
ctgaccacggtcaccgcatccaaccagccgcgcgagggctttgatttcttcccgctgacc
gtggacgtggaagagcgtatgtacgcagcaggcaagattccgggttcctttttccgtcgt
gaaggacgcccctctactgaggcgatcctggcctgccgcttgattgaccgcccgcttcgc
ccgacctttgttaagggtctgcgcaacgaggtgcaggttgtggtcacggtgctgtccatg
gacccggaggagtactacgacgttgtagccatcaacggttcttctgcggcaacgcagctg
tctggcctgccggtctccggcgcggttggcggcgtgcgcatggcgctgattgctgatgac
aagcacccggagggccagtgggtggccttcccgaaccacgcacagcacgagcgtgcgctg
ttcgagatggttgttgccggccgcattgtggaaaagaagcgtggccgcaggaccgagcag
gacgttgccatcatgatggtggaggccggcgctggcgctaatgttgtcaagcttgtcaag
gacggcttcccggctccgaccgaggagaccgtggcccagggcctggaggctgcaaagccg
tacattaagacgctgtgcgaggcgcagaccgcgctggcaaaggaagcagcgaaggacgcc
aaggagttcccgctcttcccgccgtactcggacaaggtgtttgaggcagtggagaagaag
gccgctaagcgtctgtccaagatcatgacgattgcgggcaagcaggagcgcgaggaggag
tccaacgcgttcatggaagaggtcgaggagtacctctttgacaagctcgacattgacgat
gacgaaaaagacgagattgctgccgcctccaaggagatccgcgccgcatacaacgcgctg
cagaagcagatcgtgcgcgacaagatcctctcggagggcttccgtatcgacggtcgcggg
gtcaccgacatccgcgacctcgaggtagaggtggaactcatcccgcgtgcgcacggctct
gcactgtttgagcgtggcgagacccagatcctgggcgtgaccaccctggacatgctgaag
atggagcagcacattgactctttgactccggagacctccaagcgctacatccaccactac
aacttcccgccgtactccactggtgagaccggacgtgtgggttccccgaagcgccgcgag
attggccacggtgcgcttgcagagcgcgccctgctgccggtgatcccgtcgcgtgaggag
ttcccgtacaccatccgccaggtctctgaggcgcttggttccaacggttcgacctccatg
ggttctgtgtgtgcctccacgttgtcgctgtacaacgctggtgtgccgttggctgctccg
gttgctggtattgcgatgggccttgtctctggtgaggtgggcggcaagaccgagtacgtg
gcactgaccgatatcctcggcgcagaggatgcgttcggtgacatggactttaaggttgcc
ggtacccgcgagttcattactgcgctgcagctggacaccaagctggacggcatcccgtct
gatgtgttggcaagtgctctgaaccaggcacgcgaggcacgtgagaccatcctggacacc
atggctgaggtcattgaccagccggatgagatgaatgagctggctccgaagatcaccacc
gtgaaggtgccggtgtccaagatcggtgaggtcattggcccgaagggcaagaccatcaac
tccattacggaggagaccggcgcggacatcacgattgaggacgacggcacgatctacgtc
tccgccgcccagggtgctgcagcggacgcggcgattgagaagatcaacgccattgcgaac
ccgcagatgccgaaggtgggcgagcgctacctgggcaccgtggtcaagaccgtggcgttc
ggtgcgttcgtttccatcctgccgggcactgatggcctgatccacatctccaacttgggt
ggcaacacccgcgtggagaatgtggaagacgtcatcaacgtcggcgacaaggttgaggtt
gagatccgcgatattgataaccgcggcaagatctccctggtgccggtcgaggactag
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