Corynebacterium riegelii: AK829_04845
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Entry
AK829_04845 CDS
T09801
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
crie
Corynebacterium riegelii
Pathway
crie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AK829_04845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crie03019
]
AK829_04845
03009 Ribosome biogenesis [BR:
crie03009
]
AK829_04845
Enzymes [BR:
crie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AK829_04845
Messenger RNA biogenesis [BR:
crie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AK829_04845
Ribosome biogenesis [BR:
crie03009
]
Prokaryotic type
rRNA helicases
AK829_04845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKV58610
UniProt:
A0A0K1RB12
LinkDB
All DBs
Position
complement(1005645..1007882)
Genome browser
AA seq
745 aa
AA seq
DB search
MSISENATGGENEPDVNMSENQENPQDVAADAAREDTRDAGVSEDTGAAETAANAETNET
EQILSLADVVGVEAHELVQEPEAEEASEETETEKPENGFENLGLPEDVVDAVKRVGFEQP
SPIQAQTIPHLMEGRDVVGLAQTGTGKTAAFALPVLSQIDPKQRHPQALVLAPTRELALQ
VSDSFQSFADHLGGIQILPIYGGQAYGIQLSGLRRGAQVIVGTPGRVIDHLEKGSLDISN
LRFLVLDEADEMLNMGFQEDVERILEDTPDSKQVALFSATMPGAIRRISKQYLDDPVEVT
VKSETRTNTNITQRYLFTAHRNKLDAITRILEVTEFEAMIVFVRTKNETEELAEKLRARG
FSAAAINGDIPQQQRERTVDQLRDGRLDILVATDVAARGLDVERISHVLNYDIPNDTESY
VHRIGRTGRAGRTGEAILFVTPRERRMLRSIERVTNATIEEMDLPTVDEVNESRKTKFMD
SITESLEASDLQVFKTMVREYSAANNIPMDDIAAALATQAQAGDEFLMKEPPRDKRDRRD
RDRFDRDDRRDRGGRRDRDRFDRDDRRGGRGRFANDSENFDTYRLDVGKRQHVRPGAIVG
ALANEGGLSSKDFGRITIGGDFTLVELPKNLDNAVLDRLTDTRISGQLINIQRDHGAPPR
DRGGYGGRGRGGWDRDRDDRGGRGYGRDRNRGGWDRDRDDRRDRGGRRDRDRFDRDDRRG
GRGGWDRDRDDRGGRGGFRGGRDRD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccgaaaacgccaccggcggcgagaatgagccggatgtaaacatgtcggaa
aatcaggaaaacccgcaggatgtcgcagccgatgctgcacgtgaggacaccagggatgcg
ggagtttctgaggataccggcgctgcggagaccgcagccaatgccgaaactaatgagact
gagcagattttgagccttgcagacgtagtcggggttgaggcccacgaacttgtgcaagag
cctgaagccgaagaggcttctgaagagactgagactgaaaagccggagaacgggtttgaa
aacttgggcctgccggaagacgttgtggacgcggttaagcgcgttggcttcgagcagccc
tctccaatccaggcgcagactattccacacctgatggaaggccgcgacgttgtcggcctc
gcgcagacgggtaccggtaagaccgcagcgttcgcgctgccggtgctgagccagattgac
ccgaagcagcgccacccgcaggcactggtgcttgcgccgacgcgtgagctggcactgcag
gtgtcggactccttccaatctttcgccgaccaccttggcggcatccagattctgccgatc
tacggcggccaggcctacggcattcagctgtccggtctgcgtcgtggcgcccaggtgatc
gtgggtaccccgggccgtgtgatcgaccacctggagaaggggtcgctggacatttccaac
ctgcgcttcctggtgctggatgaggccgatgagatgctgaacatgggcttccaggaagac
gttgagcgcatcctggaagacaccccggacagcaagcaggttgcactgttttccgcgacg
atgccgggcgcgatccgccgcatctccaagcagtacctggacgatccggtagaggtgacg
gtcaagagcgaaacccgcaccaacaccaacatcacccagcgctacctgttcaccgcgcac
cgcaacaagcttgacgcgatcacccgcatcctggaggtgaccgagtttgaggcgatgatc
gtgttcgttcgcaccaagaacgaaaccgaggagctggccgagaaactgcgcgcccgcggt
ttctccgccgcagccatcaacggcgacattcctcagcagcagcgtgagcgcacagttgat
cagcttcgcgacggtcgcttggacatcctcgtggccaccgacgttgccgcccgtggcctg
gatgtggagcgcatctcgcacgtgctcaactacgacatcccgaacgacactgagtcttac
gtccaccgcatcggccgcaccggccgcgcgggacgtaccggtgaggcaatcctgtttgtc
accccgcgcgagcgccgcatgctgcgctccattgagcgcgtgaccaacgcaaccatcgaa
gagatggatttgccgacggtggatgaggtcaacgagagccgcaagaccaagttcatggac
tccatcacggagtcgctggaggcttctgacctgcaggtgttcaagaccatggtccgtgag
tactccgcagcgaacaacatcccgatggatgacatcgctgcagccctggctacccaggcg
caggctggcgatgagttcttgatgaaggagccgccgcgcgacaagcgcgatcgccgtgac
cgtgatcgttttgaccgcgatgatcgccgtgatcgtggcggtcgccgtgaccgtgaccgc
ttcgatcgtgatgatcgccgcggtggacgtggtcgctttgccaacgacagcgagaacttt
gacacctaccgtcttgacgtgggcaagcgccagcacgtgcgcccaggtgccatcgttggc
gccctggcaaacgagggtggcttgagctccaaggactttggccgcatcaccattggtggt
gacttcaccctggtggagctgccgaagaacctagacaacgccgtgcttgaccgtctgacg
gatacgcgtatctccggccagctgatcaacatccagcgtgaccacggtgcgccgccgcgt
gaccgtggtggttacggtggtcgtggccgtggcggctgggaccgtgaccgtgatgaccgc
ggtggccgtggctatggccgcgaccgtaaccgtggcggctgggatcgtgatcgtgatgac
cgccgtgatcgcggtggtcgccgtgaccgtgaccgttttgatcgtgatgatcgccgcggt
ggtcgtggtggttgggaccgtgaccgtgatgatcgtggtggccgtggtggcttccgcgga
ggccgcgaccgcgactag
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