Corynebacterium riegelii: AK829_06315
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Entry
AK829_06315 CDS
T09801
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
crie
Corynebacterium riegelii
Pathway
crie03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crie00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AK829_06315
09124 Replication and repair
03420 Nucleotide excision repair
AK829_06315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crie03021
]
AK829_06315
03400 DNA repair and recombination proteins [BR:
crie03400
]
AK829_06315
Enzymes [BR:
crie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AK829_06315
Transcription machinery [BR:
crie03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AK829_06315
DNA repair and recombination proteins [BR:
crie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AK829_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
FlgN
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKV58849
UniProt:
A0A0K1RBR8
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All DBs
Position
1293794..1295434
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AA seq
546 aa
AA seq
DB search
MAYGDGPLIVQSDKTVLLEVAHPNAAKARAALAPFAELERAPEHVHTYRITPLALWNARA
AGFDAEQAVDVLERYSRFPVPQALLIDVAETMARYGRLKLIKHPAHGLILESDDPLILTE
VLRSKKIQPLVARPIDEVTVPVHPSSRGQIKQELIKLGWPVEDLAGYVDGESHPIALNHD
GWELRDYQQYATESFWEGGSGVVVLPCGAGKTIVGAASMAQAQTTTLILVTNTVAGRQWR
DELLRRTTLTPEEIGEYSGERKEIRPVTIATYQVVTRKTKGEYKALELFDSRDWGLIIYD
EVHLLPAPVFRMAADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWKELEMAGYI
ATAECVEVRTTLTAEERLVYASAETRERYRLAACSRGKLGVVEKLLALHAGKQTLIIGAY
VDQLEEIAQHIGAQLIDGTTSTKKRETAFQAFRDGEISTLVVSKVANFSIDLPEAAVAIQ
VSGTFGSRQEEAQRLGRLLRPKADGAEALFYTVVARDTLDAEYALRRQRFLAEQGYAYRL
VDADDI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcttacggcgacggcccacttatcgtccaatcggacaagaccgtactgcttgaggtc
gcgcaccccaacgccgccaaagcccgcgcggcgctcgccccgtttgcggagcttgagcgc
gcacccgagcacgtacacacctaccgcatcaccccgctggcgctgtggaatgcgcgcgcc
gcgggctttgacgcagagcaggccgttgacgtgctggagcgctactcccgcttccccgtc
ccgcaggcgctgctcattgacgtcgcagagaccatggcccgctacggccgcctcaaactg
atcaagcacccagcacacgggctgattttggagtccgatgacccgctgattctcaccgag
gttctccgcagcaagaaaatccagccgttggtggccaggcctatagatgaggtcacggtg
ccggtgcatccgtcctcacgcggccagatcaaacaagagctgatcaagctgggctggccg
gtggaggaccttgcaggctacgtcgacggcgaatcccacccgatcgcgctcaaccacgac
ggctgggagcttcgggactaccagcagtacgccaccgagtccttctgggagggcggctcc
ggtgtagtcgtcctgccctgcggcgcgggtaaaaccatcgttggcgcagcgtccatggcg
caggcgcagaccaccacgctgatcttggtcaccaacaccgtcgccggccgccagtggcgc
gacgagcttttgcgccgcaccacactcacgcccgaggagatcggcgagtactccggcgag
cgcaaagaaatccgccccgtcaccatcgccacctaccaagtggtcacccgcaaaaccaag
ggcgagtacaaggcgctcgaactgtttgactcccgcgactggggcctgattatttacgac
gaagtccatctcctccccgcccccgtcttccgtatggccgccgacctgcagtcacgccgc
cgcctgggacttaccgccacgctcgtgcgtgaggacggccgcgaggacgacgtcttctcc
ctcatcggccccaagcgctacgacgccccctggaaagaactcgaaatggccggctacatc
gccaccgccgaatgcgtcgaagtgcgcaccacactcaccgcggaggagcggctcgtctac
gccagcgccgaaacgcgtgagcgctaccgcctggcggcgtgctcgcgggggaagctgggg
gtcgtcgaaaagctactggccctacatgccggcaagcagaccttgatcatcggcgcctac
gttgaccagctggaagagattgcccagcacattggggctcagcttatcgacggcacaacg
tccaccaaaaaacgcgaaaccgccttccaagcgttccgggacggcgagatctccaccctt
gtggtgtccaaggtggcgaacttctccatcgacctgccagaggcagccgtggccatccag
gtctccggcacgtttggctcccgccaggaggaagcgcaacgcctgggccggctgctgcgt
ccgaaggccgacggcgccgaggcactgttttacaccgtggtcgcgcgcgacacgcttgat
gccgaatacgccctgcgccgccaacgctttttagcggagcaaggctacgcctacaggctt
gtagacgctgacgacatctaa
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