Corynebacterium riegelii: AK829_06995
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Entry
AK829_06995 CDS
T09801
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crie
Corynebacterium riegelii
Pathway
crie03420
Nucleotide excision repair
crie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AK829_06995
03430 Mismatch repair
AK829_06995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crie03400
]
AK829_06995
Enzymes [BR:
crie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AK829_06995
DNA repair and recombination proteins [BR:
crie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AK829_06995
MMR (mismatch excision repair)
Other MMR factors
AK829_06995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKV59903
UniProt:
A0A0K1RET0
LinkDB
All DBs
Position
complement(1431313..1434636)
Genome browser
AA seq
1107 aa
AA seq
DB search
MPPKTLSAALKQKFPPTPQQADVIGAAPGPLLVVAGAGAGKTETMAARVVWLVANGFVRP
DQVLGLTFTRKAARELDKRIRDRLATLAEDSALVARLDPTGELGKALEVIAPTVSTYDSY
AGDLIREYGLLVPVEPDARLITDAELHAVATDVVANYSGRLLAENGSNRKINSVVENLLG
LVTSMGNELADPKDVAENASIFLKETEELTGSKRTKGEYSADMTKWRAIQQERAAYLPLA
AELQAELRRRGLVTFNEQMSVAAAMARDHAQVGESQRRRFRVVMLDEYQDTSHAQRVLLT
SLFGKNQDPGLTVTAVGDPMQAIYTWRGATAANLAAFVADFPQADGSPAPKKQLTTSWRN
PPEVLELANGVSDEILGTGKDRAVEPLQPREGADAGRVQLGYFNTEDEEVTYVADELQQL
WQTSQSTGEAFKVAVLVRKNRHTAAMAEALEARGVPYEIVGVAGLLAVPEVADTVAIATM
LVRPGDSAAALRVLGGRAVGLGLADLHALAARAENLRARERGQDPDTTERAEEPAGEMTA
EERLQRELEDLVDRAAEVMARSERSAGLADAVADLGEPERYSEEGLARLKDLSTKLRWLR
THSLGKRLADLFADIMSVFNIRTEVLARDSVTRAAHLDRLLDEVAKYPGSSLDGLLDYFE
LARSLEDGLEPGNVSVKTDRVQLLTAHKAKGLEWDTVAVLHADAGTYGAKAGTFLGQIKL
LQDDTFADAEITPEFAEVETRSQFEKAAKQWVKFVRGREAEEAARLFYVAVTRSARNLYV
TASRSAPYEYFAQMREQVDEQCVVTWWDGAEAEDTDSTGSTGNTNSDERVGQWPDFVPSP
ETIAAGQAVADARESMPEVSCADPRFTQWERDVTALIEEHEALQRAEVPVVLPGELTASD
VVALRADPAQFARRARRPVPFKPNTYAKRGTAFHEWLEEFFGARPLLDENELPGSEQEEV
DAAVLEQLKSSFEQSHWASRTPAFVERAFELALGDVVVRGRIDAVFEDDEGWTVVDWKTG
MKPTHADMEAAKLQLAVYTEAWRRIAGDDKPVRAMFFYVRTGEDFAPRDLPGADELAALI
APEEAEEWTTVSCGELTRTSTAEGRRE
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaaagacgctgtcggcagcgctgaagcagaagttcccgcccacgccgcagcag
gcggacgtgattggcgcggccccggggccgctgctcgtggtggccggtgcgggtgccggc
aagacggagaccatggctgcacgcgtggtgtggctggtggccaacgggtttgtgcgccct
gatcaggtgctgggcctgacgtttacgcgtaaggcggcgcgcgagctggacaagcgtatc
cgtgaccggctggccaccctggctgaagacagcgcgctggttgcgcgcctggaccctacc
ggggagctgggcaaggcgcttgaggtgatcgcgccgacggtgtccacatatgactcgtac
gcaggggacctgatccgggagtacggacttttggtgccggtggagccggacgcgcgcctg
attacagatgcggagctgcacgccgtggccacagacgtggtggcgaactattccggcagg
cttttggctgaaaacgggtcaaaccgcaaaatcaactccgttgtggaaaacctgctgggg
ctggttacctccatgggcaatgagctggcggatcccaaagacgttgcggaaaacgcgtca
attttcttgaaggaaaccgaagaactcaccggcagcaagcgcaccaagggtgagtactcg
gcggatatgaccaagtggcgcgccatccagcaggagcgcgcagcatatttgccgctggct
gctgagctgcaggcggaactacgccgtcgcggtctggtgacgtttaatgagcaaatgtct
gtggcggccgccatggcgcgtgatcacgcgcaggtgggcgagagtcagcgtaggcgtttc
agggtggtcatgctggatgagtaccaggacacctcgcacgcccaacgcgtgttgctgacc
agcctgtttggtaagaaccaggatccagggctgaccgtgaccgcggtgggcgatcccatg
caggcgatctacacctggcgtggcgcaaccgcggcgaacctggcggcgtttgttgcagac
ttcccgcaggctgacggctcgcctgcaccgaagaagcagctgaccacctcctggcgcaac
ccacctgaggtgttggagctggccaatggggtctctgatgagattttgggtactggtaaa
gaccgcgccgtggaaccgttgcaaccgcgcgagggcgctgacgcgggccgggtgcagctg
ggctacttcaacactgaggatgaagaggtcacctacgttgctgatgagctgcagcagctg
tggcaaacatcgcaatcaacgggtgaagcgttcaaggtggccgtgctggtgcgtaaaaac
cgccacaccgcagccatggcagaggcgctggaagcgcgtggcgtgccctacgaaattgtg
ggcgttgcgggtctgctggccgtacccgaggtagcggacaccgtggccattgccaccatg
ctggtgcggcccggggattcggcggccgcgctgcgggtacttggcgggcgcgccgtgggc
cttggcctggcggatcttcacgcgcttgccgctcgtgctgagaatcttcgggcacgcgag
cggggccaagaccccgataccaccgagcgtgccgaagaacccgccggcgagatgactgca
gaggagcgcctgcagcgcgaactggaagacctcgtggatcgtgccgccgaagtcatggcg
cgctctgagcgctctgccgggttggcggacgcggtggctgatctgggtgagccggaacgc
tactcggaagaaggcttggcgcgcctgaaggacctcagcacgaagctgcgctggctgcgc
acgcacagtttgggcaagcgtttggcggacctgtttgcagacatcatgagtgtctttaac
atccgcaccgaagttcttgcccgtgacagcgtcacccgtgctgcccacctggatcgcttg
ctggatgaggtggcgaagtacccgggttctagtctggacggactgctggactactttgag
ctggcacgttcgttggaagacgggctggaacccggcaacgtgagtgtgaagaccgaccgt
gtgcagctgctcaccgcccataaggcgaaaggcctggagtgggacaccgtggcggtactg
cacgcggatgccggcacctacggcgcaaaagccggcacgtttttgggccagatcaaactc
ctgcaagacgacacgtttgcagatgctgagatcactccggagtttgcggaggtggaaacc
cgctcccagtttgagaaggccgccaagcagtgggtgaagtttgtccgcgggcgcgaagcc
gaggaagcggcgcgactgttttatgttgccgtgacccgttccgcccgcaacctgtatgtc
accgcgtcgcgctccgcgccctatgagtattttgcgcagatgcgtgagcaggtggatgag
cagtgcgtggtcacctggtgggacggcgcggaagccgaggacactgacagtacaggcagc
acaggcaacacgaacagcgatgaacgtgtgggccagtggccggatttcgtgccttcgcca
gagaccatcgcggcaggccaagcggtggcagacgcacgcgaatccatgccggaagtgagc
tgcgcagatccccgcttcacacagtgggagcgcgacgtcaccgcgctgattgaagagcac
gaggcgctgcagcgcgccgaggtcccggtggtgttgcccggtgagctgacggcgtctgat
gtggtggcgcttcgcgctgaccccgcccagtttgctcgccgtgcgcgcaggccggtgccg
tttaagccgaacacgtacgctaagcgcggcacggcgttccacgagtggctggaggagttc
ttcggggcacgcccactgctggatgaaaatgagctgccgggcagtgagcaagaggaggtc
gacgccgccgtgcttgagcagctcaagagctcctttgagcagagccattgggccagccgc
accccggcgtttgtggagcgcgccttcgagctcgccttgggtgatgtggtggtgcgcggg
cgtatcgacgccgtctttgaagacgatgaaggctggaccgtcgtggactggaagaccggc
atgaagcccacgcacgcggacatggaggcggcgaagctgcagttggcggtgtacacggaa
gcgtggcgcaggatcgccggtgatgacaagccggtacgcgcaatgttcttctacgtgcgc
accggcgaggacttcgctccacgcgaccttccgggcgcggacgaactggcagcgctgatc
gcgccggaggaagccgaggagtggactacagtgtcttgcggtgaattaaccagaaccagc
acagcggaagggaggcgcgagtga
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