Corynebacterium riegelii: AK829_08235
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Entry
AK829_08235 CDS
T09801
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
crie
Corynebacterium riegelii
Pathway
crie03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crie00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AK829_08235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crie03021
]
AK829_08235
03400 DNA repair and recombination proteins [BR:
crie03400
]
AK829_08235
Enzymes [BR:
crie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AK829_08235
Transcription machinery [BR:
crie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AK829_08235
DNA repair and recombination proteins [BR:
crie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AK829_08235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKV59935
UniProt:
A0A0K1RES1
LinkDB
All DBs
Position
complement(1688776..1692789)
Genome browser
AA seq
1337 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDDEARHNDLSTLEAEMIMEKKEVEDDTNSEIAERAQKLEED
LAELEAAGATAAARKKVQNAADKEMTHLREAGEREVERLDEIWTTFTKLAPKQMIIDENL
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLDAEAEELRGIIAEGKGQKKVRALKRLKVVA
AFQRSGNDPAGMILDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVDNDYAQNIKSAKRMVERQR
PEVWDVLEEAIAEHPVLLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTMLKGENEIGGE
GAYAPADENGPARGVYSSYREAIMAYDLGVLGLQAPIQVRIDHLRPTPEIEAEQFPDGWE
KGQAWTTQTTLGRIMFNELMPFNFPYQEGAMVRKGGGSGKVLLGDIIQSMVEKYPMITVA
QVLDKMKDAGFYWATRSGITISMSDVLVLPNKNEVLEEYEREAEEIERKFWEKGALTEEN
RYDRLVELWQDATNKVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSRG
EYITRPIKTSFREGLTVMEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRED
DCGTHQGVKVPVAVVLAGSDNEKKYARHDLVETSVAGRVLAADAKDAEGNVVLEAGAELS
EERIDALVAAGIVDVKVRSVLTCQTPTGVCAKCYGKSMATGQLVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNCAPIASVAGTITLEDEGNFWTLT
IHPDDGSDVVVYEKLSKRQGLAQVRRPMESNPDAYIERSLREGDHVEVGDRLLRGAADPH
DVLEVLGRRGVEKHLIDEVQAVYRTQGVSIHDKHIEIIIRQMLRRGTVIDSGTTEFLPGT
LVDLAEARQVNAAAVTDGGQPAEMRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNIQVKPTEAARSAAYSIPSFGDSIYGDEGYG
EFTGASVPLDEYGFDQI
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaacctcttcgatgagcttcgcatcggcctggccaccgccgacgacatc
cgtcgttggtcccacggcgaggtaaagaagccggagaccattaactaccgcaccttgaag
ccggagaaggatggcctcttctgtgagcgcatcttcggccccacccgtgactgggagtgt
gcctgcggcaagtacaagcgcgtccgctacaagggcattatctgtgagcgctgtggcgtc
gaggtgaccaagtccaaggttcgccgcgagcgcatgggccacattgagctggctgcgccg
gtgacgcacatctggtacttcaagggtgtgccgtcgcgtctgggctacctgctggacctg
gcgccgaaggaccttgagcgcattatttacttcgctgccaacatcatcaccagcgttgat
gatgaggcacgccacaatgatctctccacccttgaggcagagatgatcatggagaagaag
gaagtcgaggacgacaccaactctgagatcgccgagcgcgctcagaagctggaggaggac
ctggctgaacttgaggctgccggcgcaaccgcggctgcacgcaagaaggtgcagaacgct
gctgacaaggagatgacgcacctgcgtgaggcaggtgagcgtgaggtggagcgtctggac
gagatctggaccaccttcaccaagctggctccgaagcagatgattattgatgagaacctg
tacgaggaactcgtcgaccgctacgaggactacttcaccggcggcatgggtgcggaagct
atccagaccctgatccgtaacttcgacctggatgctgaggcagaggagctgcgcggcatt
atcgctgagggcaagggccagaagaaggtccgcgcactgaagcgtctgaaggttgtcgct
gcgttccagcgctccggcaatgacccggcaggcatgatcctggatgcgatcccggtgatc
ccgccagagctgcgtccgatggtgcagctggacggtggtcgtttcgccacctccgacctc
aatgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgattgacctc
ggcgcgccagagatcattgtgaacaatgagaagcgcatgctgcaggagtccgtggacgcg
ctgtttgacaacggtcgccgcggccgcccggtcaccggcccgggtaaccgtccgctgaag
tccctgtctgacctgctgaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtggactactccggtcgttccgtgattattgttggtccgcagttgaagctgcacgag
tgtggtctgccgaagctgatggcacttgagctgttcaagccgttcgtgatgaagcgcctg
gtggacaatgactacgcgcagaacatcaagagcgccaagcgcatggtggagcgtcagcgt
cctgaggtgtgggacgtgctggaagaggccattgcagagcacccggtgctgttgaaccgc
gcaccgacgctgcaccgccttggtatccaggcgtttgagccgaagctggttgagggtaag
gcaattcagctgcacccgctggcttgtgaggcgttcaacgccgacttcgacggtgaccag
atggctgttcacctgccgctttccgctgaggcacaggctgaggcccgcatcctgatgctg
tcctccaacaacatcctgtccccggcgtccggcaagccgctggctatgccgcgtctggac
atggtgaccggcctgtacttcctgaccatgctgaagggcgaaaacgagatcggcggcgag
ggcgcatacgctcctgctgatgagaacggcccggcacgtggcgtgtactcctcctaccgt
gaagccatcatggcttacgacctgggtgtacttggcctgcaggcaccgatccaggtgcgc
attgatcacttgcgtccgacgccggagatcgaggccgagcagttcccggacggctgggag
aagggccaggcttggaccactcagaccaccctgggccgcatcatgttcaacgagctgatg
ccgttcaacttcccgtaccaggaaggcgccatggtgcgcaagggcggcggctccggcaag
gtgctgctgggtgacatcattcagtccatggtggagaagtaccccatgatcaccgttgct
caggtgctggacaagatgaaggacgctggcttctactgggctacccgctccggcatcacc
atctccatgtctgacgtgctggtgctcccgaacaagaacgaagtcttggaggagtacgag
cgcgaggcagaagagattgagcgcaagttctgggagaagggtgctctgaccgaggagaac
cgctacgaccgcctggtcgagctgtggcaggacgctaccaacaaggtgggtcaggccgtg
gaggatctctacccggatgacaacccgattccgatgattgtgaagtccggtgctgccggt
aacatgcgccagatctggaccctggccggcatgaagggcatggttgtgaactcgcgtggt
gagtacatcacgcgtccgatcaagacctccttccgcgaaggcctgaccgtgatggagtac
ttcaacaactcccacggttcccgtaagggcctggccgatacggctctgcgtaccgcagac
tccggctacctcacccgtcgtctggtggacgtggcgcaggacgtcatcgtccgcgaggat
gactgtggcacccaccagggcgtcaaggtacctgttgccgttgtcctcgcaggctcggac
aacgagaagaagtacgcccgtcacgacctggtcgagacctctgtcgccggccgtgtcctg
gcagctgacgcgaaggacgccgagggcaacgttgtgcttgaggctggcgctgagctttct
gaggagcgtatcgacgcactcgtggccgccggcatcgtggacgtcaaggtccgctccgtg
cttacctgccagaccccgactggtgtctgcgcgaagtgctacggcaagtccatggctacc
ggccagctggtggatatcggcgaggccgtcggcatcgtggctgcacagtctattggtgag
ccgggtacccagctgacaatgcgtaccttccaccagggtggtgtcggtggcgacattacc
ggtggtctgccgcgtgttcaggagctgttcgaggcacgtgtgccaaagaactgcgcaccg
atcgcatccgtggcaggcacgatcacccttgaggacgagggcaacttctggaccctgacc
atccacccggatgacggctcggatgttgtggtctacgagaagctgtcgaagcgtcagggc
ctggcccaggtgcgccgcccgatggagtccaacccggacgcctacatcgagcgttccctg
cgcgagggcgaccacgttgaggtgggcgaccgcctgctccgtggtgctgctgacccgcac
gacgtgctcgaggttctcggccgtcgtggtgtggagaagcacctgatcgatgaggtccag
gctgtgtaccgcacccagggtgtgtccattcacgacaagcacatcgagatcatcatccgc
cagatgctgcgccgcggcaccgtcatcgactcgggtaccaccgagttcctgccgggcacc
ctggtggatctggcggaggctcgccaggtcaacgccgctgctgtcaccgacggtggccag
ccggctgagatgcgttccgagatcatgggtatcaccaaggcctccctggctacggagtcc
tggctgtccgcagcctccttccaggagaccacccgtgtgctcacggacgccgcgattaac
aagcgctccgacaagctgatcggcctgaaggagaacgtgatcatcggtaagctgatcccg
gccggtacgggcatttcccgctaccgcaacatccaggtcaagccgaccgaggcggcacgc
tccgcggcttactcgatcccgagcttcggcgactccatctacggcgacgaaggctatggc
gagttcaccggcgcctccgtcccgctggatgagtacggcttcgatcagatctag
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