Comamonas resistens: QMY55_01710
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Entry
QMY55_01710 CDS
T09688
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
crj
Comamonas resistens
Pathway
crj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QMY55_01710 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crj03021
]
QMY55_01710 (rpoC)
03400 DNA repair and recombination proteins [BR:
crj03400
]
QMY55_01710 (rpoC)
Enzymes [BR:
crj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QMY55_01710 (rpoC)
Transcription machinery [BR:
crj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QMY55_01710 (rpoC)
DNA repair and recombination proteins [BR:
crj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QMY55_01710 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WHS65901
UniProt:
A0ABY8SXA7
LinkDB
All DBs
Position
370687..374913
Genome browser
AA seq
1408 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMTEDDYDAKQLEYGYDEFTAK
MGAEGIKDLLEGIDIDVEIERLRGDLTGSEVKVKKNAKRLKLLEAFKKSGIKPGWMVMEV
LPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQE
AVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPYL
KLHQCGLPKLMALELFKPFIFAQLEQRGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPI
MLNRAPTLHRLGIQAFEPILIEGKALQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEAR
VLMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGMVFADLMELQRALDADE
TELHAKVSVRLTEWNKNKETGEFEPVTSLVETTVGRALLSEILPKGLAFSNMNKALKKKE
ISKLINASFRKCGLKATVVFADKLLQNGFRLSTHAGISISIDDMLVPPQKADILARAESE
VKEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTTDRHGNEVDQESFN
AIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVTQDLVVNEQDCGTSNGYLMRAIVEGGEVIESLRDRVL
GRSTAEDVLHPENRSVLLAAGTLLDEDTIEELENQGVDEIKVRTALTCETRFGLCATCYG
RDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGTIGF
NSTMRYVSNTKGELVVISRSGEIVISENGRERERHKVPYGAVLTIKPDETIKAGKILANW
DPLTRPIITEYAGQVRFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLI
DANNQEVKIPGTDHAVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARTPKDKGTLAEMTGTVSFGKETKGKIRLQITDLEGKVWEELVPKERNILVHEGQ
VVNKGESIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVIIENSGDTTYIQGEQVERSEVLNTNEEMQKEGKLPATYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDEMDDAERRA
IAEAEEAELAGVVADDAEAAPAGEASAE
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaatttacgcctgatgagcatttcgatgccatc
aagatcggcctggcttcgcccgaaaagatccgctcctggtctttcggtgaagtgaagaag
cctgaaacgatcaactaccgtactttcaagcccgagcgtgatggtctgttctgcgccaag
atctttggcccgatcaaggactacgaatgcctgtgcggcaagtacaagcgcctcaagcac
cgcggtgtgatctgcgagaagtgcggcgttgaagtcacacagaccaaggtgcgtcgcgaa
cgcatgggtcacatcgacctggccgcgccctgcgctcacatctggttcctgaagtccctg
ccttcgcgcctgggcctggtgctggacatgacgctgcgtgacatcgaacgcgtgctgtac
ttcgaagcctatgtggtgaccgaccccggcatgactccgctgaagaagttcagcatcatg
accgaggacgactacgacgcaaagcaactcgagtacggttacgacgaattcaccgccaag
atgggcgctgaaggtatcaaggacctgctcgaaggcattgatatcgacgtcgagatcgaa
cgcctgcgcggcgatttgaccggctctgaagtcaaggtcaagaagaacgccaagcgcctg
aagctgctcgaagcgttcaagaagtccggcatcaagcccggctggatggtcatggaagtg
ctgcccgtgctgcctcccgatctgcgtcctctggtgcctctggacggtggccgtttcgcc
acttccgacctgaacgacctgtatcgccgcgtcatcaaccgtaactcgcgtctgcgccgc
ctgctggagctcaaggctcccgaaatcattgctcgcaatgaaaagcgcatgctgcaagaa
gcggtggattcgctgctggacaacggccgtcgcggcaaggccatgacgggcgccaacaag
cgtgccctgaagtctctggccgacatgatcaagggcaagagcggtcgtttccgtcagaac
ttgctgggcaagcgcgtggactactccggtcgttccgtgatcaccgtgggtccttacctc
aagctgcaccagtgcggtctgcccaagctgatggctctggagctgttcaagcccttcatc
ttcgcgcagctcgagcagcgcggcatcgccacgaccatcaaggcggccaagaaagaagtg
gaagccggtacgcccgtggtgtgggacatccttgaagaagtcatcaaggaacaccccatc
atgctcaaccgtgcgcctacgctgcaccgtttgggtatccaggcgtttgagcctatcctg
atcgaaggcaaggccctgcaactgcacccgctggtctgcgcggccttcaacgccgacttt
gacggtgaccagatggctgttcacgtgcccctgtctgtggaagcacagatggaagcccgc
gtgctgatgctggcctcgaacaacgtgctgttccccgcctcgggcgagccctccatcgtt
ccttctcaggacgtggtgctgggtctgtatcacgccacgcgtgaaaagatcaacggcaag
ggcgaaggcatggtgtttgccgacctgatggagctgcaacgtgctctggatgccgacgag
accgagctgcatgccaaggtgagcgtgcgcctgaccgagtggaacaagaacaaggaaacc
ggcgaattcgagcccgtgacctcgctcgtggaaaccaccgtgggtcgtgctctgctgtct
gaaatcctgcccaagggcctggctttcagcaacatgaacaaggcgctgaagaagaaggaa
atctcgaagctgatcaatgcttcgttccgcaagtgcggtctgaaggccaccgtggtgttc
gctgacaagctgctgcaaaacggtttccgcctgtccacgcacgccggtatctcgatctcc
atcgacgacatgctggtgcctccgcaaaaggccgacatcctggcccgcgcagagtccgaa
gtgaaggaaatcgagcagcagtacgtctccggtctggtgaccgctggcgagcgctacaac
aaggtggtggacatctggggcaaggccggtgacgacgtgtccaaggtgatgatggaccag
ctcaaggtccagaagaccaccgaccgtcacggcaacgaagtcgatcaggaatcgttcaac
gcgatttacatgatggccgactccggcgcccgcggctccgcagctcagattcgtcagctg
gccggtatgcgtggtctgatggccaagcctgacggctcgattatcgagacgcctattacc
gcgaacttccgcgaaggcctgaacgttctgcagtacttcatctccacccacggtgctcgt
aagggtctggcggatacggcgctgaagacggctaactccggttacctgactcgtcgtctg
gtggacgtgacccaggatctggtcgtgaacgaacaggattgcggcacttccaacggttac
ctgatgcgcgccatcgtcgaaggcggtgaagtgatcgaatccctgcgcgaccgcgtgctg
ggccgctcgaccgccgaagatgtgctgcatccggaaaaccgctccgtgctgctggccgca
ggtactctgctggacgaagacaccatcgaagagctggaaaaccagggcgtggacgaaatc
aaggtgcgtacggctctgacctgcgagacccgtttcggtctgtgcgcaacctgctacggc
cgtgacctgggtcgcggcggcctgatcaacctcggcgaagccgtgggtgtgatcgctgcc
cagtccatcggtgaacccggcacgcagctgaccatgcgtaccttccacatcggtggtgcc
gcttcgcgtgccgccatcgcttcgagcgtggaagccaagtccaacggtacgatcggcttc
aacagcacgatgcgctacgtgtccaacaccaagggtgagctggtggtgatttcccgttcc
ggcgaaatcgtgatcagcgaaaacggccgcgagcgtgagcgtcacaaggtgccttacggc
gccgtactgaccatcaagcccgacgaaaccatcaaggctggcaagatcctggcgaactgg
gatccgctgacccgacccatcattaccgaatacgccggtcaagtgcgtttcgagaatgtg
gaagaaggtctgacggtggccaagcaggtcgacgaagtgaccggtctgtccactctggtg
gtgatcgaccccaagcgtcgcggctctgccaaggtggtgcgtcctcaggtcaagctgatc
gacgccaacaaccaggaagtcaagatccccggtaccgaccatgccgtgacgatcggcttc
caggttggcgctctgatccaggtgcgcgacggccaggacgtgggccccggcgaagtgctg
gcccgtatccccgtggaaggtcagaagacccgagacattaccggtggtctgcctcgcgtg
gccgagctgttcgaagcccgtacgcccaaggacaagggcactctggccgagatgaccggt
accgtgtccttcggtaaggaaaccaagggcaagatccgcctgcagatcaccgatctggaa
ggcaaggtctgggaagaactggtgcccaaggagcgcaacattctggtccacgaaggccag
gtggtgaacaagggcgaatccatcgtcgacggtcccgccgatcctcaagacatcctgcgc
ctgctgggtatcgaagagctgtcgcgctacatcgtggacgaggtgcaggatgtgtatcgc
ttgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgt
cgcgtgatcatcgagaactccggcgataccacctacatccagggtgaacaggtcgagcgt
tccgaggtgctcaacaccaacgaagagatgcaaaaggaaggcaagctgcctgccacatac
tccaacgtgctgctgggtatcaccaaggcttcgctgtccaccgactcgttcatctccgcg
gcttccttccaggaaaccacgcgtgttctgaccgaagctgccatcatgggcaagcgcgac
gaactgcgtggcctgaaggaaaacgtgatcgtgggtcgtctgatccctgccggtaccggt
ctggcctatcaccaggctcgcaaggccaaggacgaaatggacgacgccgagcgccgtgcc
attgccgaggctgaagaagcggaactggccggtgtcgtggctgatgacgccgaagccgcg
ccagctggcgaagcatcggctgaataa
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