Comamonas resistens: QMY55_01755
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Entry
QMY55_01755 CDS
T09688
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
crj
Comamonas resistens
Pathway
crj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QMY55_01755 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crj03400
]
QMY55_01755 (recB)
Enzymes [BR:
crj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QMY55_01755 (recB)
DNA repair and recombination proteins [BR:
crj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QMY55_01755 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WHS65908
UniProt:
A0ABY8SS85
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All DBs
Position
384849..388649
Genome browser
AA seq
1266 aa
AA seq
DB search
MSAPAQQVSSHVLQPLQFPLWGSRLIEASAGTGKTWTIAALYLRLVLGHGAENGFARPLT
PPEILVMTFTRAATRELSDRVRARLIEAVQCFRGEAEPEAHDQFLRDLRDAYAPGAERDK
AAWRLDMAAQCMDDAAIHTIDAWCQRMLREHAFDSGNLFDETLEADESQRQLEAAQDYWR
QQCYPLSGEVLEEVLKVWPSVNALVKDMQSLLRENVPHTHADLQLGSLVDTALQQQKAQL
QALSEGWADKALRLEDWLDGQLANNKSAWNGLKLRQANYKGWLKTLRDWAAAPNLALEQA
LKTGAKRLIPAGLDEARKGDAPVDLPPESQALEQLLLQLAAIPSFASQLRLHAAQHVQQR
LLWIKRQAGTFGFADMLQRLDTALAGDNGAALRDSILAQYPAALIDEFQDTSPLQYRLFD
QVYRTAHNAEDRARDSALLLIGDPKQSIYGFRGADIYSYLQARQSTEGRHYVLDTNYRST
EALVDAVNQWFAQAEQRPGEGAFMFRAGHSNPLPFEPVKAQGRGEMLVQASQPVPALTIA
WDGSGGEPLSNDEIRRRGAEFCASQIVHWLMDETAGFARKGQELQRIRPADIAVLVRTGK
EAAAVRRALAKRSVASVYLSDQDSVFASGEAQDLLLWLRAVAAPLDGLAVRAGLATPMMD
LSFDELAWLASDDEAFDARSEQMKELHSVWLRLGVLAMLRQTLYRFNLPARWLLKTGGER
RLTNYLHLAELLQSAGAQLEGEQALIRWLATQIESPGATGDAQIVRLESDADLVKVVTIH
KSKGLEYPVVCLPFGGSFRSLDNKAAYLSLPVQGEYGPARELVLDYDGAQLARADKERLR
EDLRLLYVALTRPRHALWMGLAPMKRGHSKSCANEQGAAGYLLAGDASQSVAGWRASIEI
LSQQCAHISVLDLPPELPLLQRYVPAQELPALQGAPVYTAEFDRRWGIGSFSSLTRAMAA
PSLPVLAVAAISPAEDERQMQREEDSLLDLSALPMTAGARSSAAVWHRFMRGPVVGNFLH
DQMEWLAGEGFALSEQDDAEVSDPVNASLSTRLSTRLLRRCERAGRKDQAADVLQWLRAV
VHQPLRPLGVTLADLGAQDALLAEMEFWLPAQRLSAQRIDVLCREHILPGQPRPVLPERE
LHGMLMGFADLVFCHAGRYWVLDYKTNHLGSEAAAYTPDALAGAMLEHRYDVQAALYLLA
LHRLLQSRLGDAYEPAQHLGGALYFFMRGIDGEAQGMHVLPAPLALLQALDALLGGSAEP
VQEMLP
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccggcccaacaagttagcagccatgtgctgcagcccctgcagtttccgctc
tggggatcgcgcctgattgaagccagtgccggcacgggcaagacctggacgattgctgcg
ctatacctgcggctggtgctgggccatggcgccgagaacggttttgccaggccgctgacg
ccgcccgagattctggtcatgacctttacccgtgcggccacgcgcgaattgtccgaccgg
gtgcgggcgcgtctgatcgaagcggtgcaatgctttcgaggcgaagccgaacccgaggca
cacgaccagtttctacgcgatttgcgcgacgcctatgcgccgggcgcagagcgcgataag
gcggcctggcggctcgatatggcggcacagtgcatggacgatgccgccattcacaccatt
gacgcctggtgccagcgcatgctgcgcgagcacgcgtttgacagcggcaatctgttcgac
gagacgctggaagccgatgaaagccagcgtcagctggaggctgctcaggactactggcgc
cagcagtgctacccgctgtcgggcgaggtgctggaagaggtactcaaggtctggcccagc
gtgaatgcgctggtgaaagatatgcaatcgctgctgcgtgaaaacgtgccgcacacccat
gccgatttacagctgggttccttggtcgataccgcgctgcagcagcaaaaagcgcagttg
caggctctgagcgaaggctgggccgacaaagccctgcgcctggaggactggctggacggc
cagctggccaacaacaagagcgcctggaacgggctcaagctgcgccaggccaattacaag
ggctggctcaagacgctgcgcgactgggccgcggcgccgaatctggcgctggaacaagcg
ctgaaaaccggggccaagcgcctgattccggcggggctggacgaagcccgcaagggcgat
gccccggtggacttgccgcccgagtcgcaggcactggagcaactgctgctgcaactggca
gccattccaagctttgccagccagctgcgcctgcatgcggcgcagcatgtgcagcagcgc
ctgctgtggatcaagcgccaggccggcacctttggctttgccgatatgctgcagcgcctg
gatacagcgctggcgggcgataacggcgccgcgctgagggacagcattctggcccagtac
ccggcggccttgattgacgagtttcaggacacatcgccgctgcaataccgcttgttcgac
caggtctaccgcacggcccataacgcagaagaccgcgcccgggacagcgcgctgctgctg
attggcgaccccaagcagtccatctatggctttcgcggtgccgacatttacagctatctg
caggcccgccagtccaccgaggggcggcactatgtgctggacaccaattaccgctcgacc
gaagcgctggtcgatgccgtcaaccagtggtttgcgcaggcggagcagcgccccggagag
ggggcgttcatgttccgcgcggggcacagcaatccgctgccctttgagcccgtgaaggcc
cagggccgcggcgagatgctggtgcaagccagccagcccgtaccggcgctgacgattgcc
tgggacggcagcggtggcgagccgttgagcaatgacgagatacgccgccggggcgcagaa
ttctgcgccagccagatcgtgcactggctgatggatgagacggcgggctttgccagaaaa
gggcaagagctgcagcgcattcgccccgccgatattgccgtgctggtgcgcaccggcaag
gaggctgctgccgtgcggcgggcgctggccaagcggtcggtggcatcggtttatctatcg
gaccaggactcggtgtttgccagcggcgaagcgcaggacctgctgctgtggctgcgtgcc
gtggcagcgccgctcgatgggctggccgtgcgggcaggtctggcgacgccgatgatggac
ctgtcttttgacgaactggcctggctggccagcgatgacgaggctttcgatgcgcgcagc
gagcagatgaaggagttgcacagcgtctggctgcgcctgggcgtgctggccatgctgcgc
cagaccttgtatcgcttcaacctgcctgcgcgctggctgctgaaaaccggtggtgagagg
cgtttgaccaactatctgcacctggccgagttgctgcaaagtgctggcgcccagctggag
ggtgagcaggcgctgatccgctggctggccacgcagatcgagtccccgggcgcgacgggg
gacgcccagatcgtgcggctggagtcggatgcagatctggtcaaggtcgtcaccatccac
aagagcaagggccttgaatatccggtggtctgcctgccgtttggcggcagcttcaggtca
ttggacaacaaggccgcttatctgtcgctgccggtgcaaggcgaatatggcccggcgcgc
gagctggtgctggactatgacggcgcgcaactggcccgggccgacaaggagcgtctgcgc
gaagacctgcgcctgctctatgtggcgctgacccggccgcgccatgcgctgtggatgggc
ctggcccccatgaaacgggggcacagcaaaagctgcgccaacgaacagggtgcagcgggc
tatctgcttgccggagatgcttcgcaatctgtagcgggctggcgtgccagcattgagatc
ctgagccagcaatgcgcgcatatcagcgtgctggacttgccgccggagctgccgctgctg
cagcgctatgtgcccgcgcaggagctgcctgcgctgcagggcgcgccggtgtacacggcg
gagttcgaccgccgctggggcattggcagcttctcgtcgctgacccgtgccatggcggcc
cccagcctgcccgtgctggccgtggcggccatcagccctgccgaggacgagcggcagatg
cagcgcgaagaagactctttgctggatctgagcgccttgcccatgaccgcaggggcgcgc
agcagcgccgccgtgtggcatagattcatgcgcggcccggtggtgggcaacttcctgcac
gaccagatggagtggctggccggtgaaggctttgcgctgtccgagcaggatgatgccgaa
gtctccgaccctgtgaacgcctctttgagtacccgtttgagcactcgtttgctgcgccgc
tgcgagcgcgcaggccgcaaggatcaggccgccgatgtgttgcagtggctgcgcgccgtg
gtgcaccagccgctgcggccgctgggcgtgacgctggctgatctgggcgcgcaggatgcc
ctgctggccgagatggagttctggctgcccgcgcagcgcctgtcggcccagcgcatcgac
gtcctgtgccgcgaacatatattgcccggccagccgcgcccggtgctgcccgagcgcgag
ctgcacggcatgctcatgggctttgccgacctggtgttctgtcatgcgggccgttactgg
gtgcttgattacaagaccaaccatctggggagcgaggctgcggcctatacgcccgatgcg
ctggccggcgccatgctggagcaccgctacgacgtgcaggccgcgctctacctgctggca
ctgcatcgcttgctgcaaagccggcttggcgatgcctatgagcctgcgcagcacctgggc
ggtgcgctctactttttcatgcgcggcatcgatggcgaggcccaaggcatgcatgtgctg
ccagcgccgctggcattgctgcaagcgctggatgcgctgctcggaggcagtgccgaaccc
gtacaggagatgctgccatga
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