KEGG   Comamonas resistens: QMY55_05060
Entry
QMY55_05060       CDS       T09688                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
crj  Comamonas resistens
Pathway
crj03420  Nucleotide excision repair
crj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:crj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QMY55_05060
   03430 Mismatch repair
    QMY55_05060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crj03400]
    QMY55_05060
Enzymes [BR:crj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QMY55_05060
DNA repair and recombination proteins [BR:crj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QMY55_05060
   MMR (mismatch excision repair)
    Other MMR factors
     QMY55_05060
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 AAA_11 Microplusin
Other DBs
NCBI-ProteinID: WHS66509
UniProt: A0ABY8STX0
LinkDB
Position
1108763..1111249
AA seq 828 aa
MFPIDLLDSAPEGANSGAHPASHSPLLTGLNDEQLAAVTLPAGHALILAGAGSGKTRVLT
TRIAWLLQTGQATPGSIMAVTFTNKAAKEMLARLSAMLPYNVRGMWIGTFHGLCNRMLRA
HYQVAKLPQAFQILDTQDQLSAIKRLCKQFNVDDERFPPKQLMYFIAGCKEEGMRPGDVV
ATDPDTRKKVEIYQLYEEQCQREGVVDFGELMLRSFELLRDDVHLRQHYQRRFQHILVDE
FQDTNKLQYQWLKQLAGEADGSRFVSQSSVIAVGDDDQSIYAFRGARVGNMADFIREFEV
KNQIKLEQNYRSYSNILDCANALISHNSNRLGKNLRTTQGPGEPVRIYEAPSDLAEASWM
VDEIKQLVKNDGFTRQEIAVLYRSNAQSRVIESALFNSGIPYRVYGGLRFFERAEIKHAL
AYLRLLENPHDDTSFMRVVNFPARGIGARTIEQLQDAARSSGCSLSDAVTAVGGAAGTKL
QGFVAQIDVLREQTQGKTLREIIETVEEQSGLIEHYRNEKEGADRIENLQELVTAAESFV
TQEGFGKDAVALPLDAQEILPATNLTQSPVSQGLDPEAPLLDQPLQAPAGTLASMVNADT
GETMSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGVEEGLFPHEN
AMMDRGGLEEERRLAYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPEEALKWI
TPRQSGFGSFAPNSGAGGAYGSRGSGQFGSNSGWSNKTEVFASPVVPRQKAEPSHGIKAG
ITVFHNKFGEGKVLAVEGQGDDARAQVSFGRHGTKWLALAIAKLTVVE
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgttcccgatcgacctgcttgactccgcgccggaaggtgcaaattctggtgcccatccc
gcctctcattcccctttgctgacgggtctcaatgacgagcaactggccgcggtgactttg
cctgcgggccatgcgctgattctggcgggtgcaggttccggcaagacgcgcgtgctgacc
acgcgcattgcttggctgctgcagaccggccaggccacgcccggctccatcatggccgtg
accttcaccaacaaggcggccaaggagatgctggcgcgcctttcggccatgctgccctat
aacgtgcgcggcatgtggattggcacctttcacggcctgtgcaaccgcatgctgcgcgcc
cactatcaggtggcaaagctgccgcaggcgtttcagatcctcgatacccaggatcagctc
tcggccatcaaacggctgtgcaagcagttcaatgtggacgacgagcgctttccgcccaag
cagctgatgtacttcatcgccggttgcaaggaagagggcatgcgccccggcgacgtggta
gcgaccgatccggacacccgcaaaaaggtcgagatctaccagctctatgaagagcaatgc
cagcgcgaaggtgtggtcgatttcggcgagctgatgctgcgctccttcgagctgctgcgc
gacgatgtgcacctgcgccagcactatcagcgccgctttcagcatattctggtggacgag
ttccaggacaccaacaagctgcaataccagtggctcaagcaactggcgggcgaggccgat
ggcagccgttttgtctcgcagtccagcgtgatcgccgtgggcgacgacgatcagagcatc
tatgcctttcgcggagcgcgcgtgggcaatatggcggacttcatccgcgaattcgaggtg
aagaaccagatcaagctggagcagaactaccgctcttacagcaacatcctggactgtgcc
aatgcactgatcagccacaacagcaaccgcctgggcaagaacctgcgcaccacgcagggg
ccgggcgagccggtgcgcatctacgaggcccccagcgacctggccgaggcctcgtggatg
gtggacgaaatcaagcagctggtgaagaacgacggcttcacgcgccaggagattgccgtg
ctctaccgcagcaatgcgcaaagccgggtgattgagtcggcactgttcaactccggcatt
ccctaccgcgtctacggcggcctgcgctttttcgagcgcgccgaaatcaagcatgcgctg
gcctatctgcgcctcctggagaacccgcacgacgacaccagcttcatgcgcgtggtgaac
ttcccggcgcgtggcattggcgcgcgcaccatcgagcagttgcaggacgcggcgcgcagc
agcggttgctcgctcagcgatgccgtcaccgctgtgggcggagccgccggcaccaagctc
cagggttttgtggcacagatcgatgtgctgcgcgagcagacgcaaggcaagacgctgcgc
gagatcatcgagactgtggaagagcaaagcgggctgatcgagcattaccgcaatgaaaaa
gaaggcgccgaccgcatcgagaacttgcaggaactggtgacggcggccgagagctttgtg
acccaggaaggctttggcaaggacgcggtggccctgccgttggatgcacaggagattctg
cccgcaacgaatctgacacaaagcccggtcagccaggggctggaccccgaggccccgttg
ctcgatcagccgttgcaggcaccggcaggcacgctggcatccatggtcaatgcagacacg
ggtgaaaccatgtcgccgctggctgcctttctctcccatgcctctctggaggccggcgac
aaccaggcccaggcaggtcaggacgccgtgcagctgatgacggtgcatgccagcaagggc
ttggagttcgacgccgtgttcatcggcggtgtggaagaaggcctgttcccgcatgagaac
gcgatgatggatagaggcggtctggaggaagagcgccgcctggcctatgtggccatcacg
cgcgcgcgcaagcggctgtatctgagccattcgcagacgcgcatgttgcatggtcagacg
cgctacaacgtcaagagccgtttctttgacgagctgcccgaagaagcgctcaagtggatc
acgcccagacaaagcggtttcggcagtttcgctcctaattcaggtgctggtggcgcttat
ggatcaaggggttcgggccagtttggttccaactctggctggagcaacaaaacggaggtc
tttgccagccccgtggtgcccaggcaaaaggccgagccctcgcatggcatcaaggcgggc
atcacggtgttccacaacaagttcggcgaaggcaaggtgctggccgtcgaaggccagggc
gacgatgctcgtgcccaggtgagcttcggccgccatggcaccaagtggctggcgctggcg
attgccaagctcaccgtcgtggagtaa

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