Comamonas resistens: QMY55_05780
Help
Entry
QMY55_05780 CDS
T09688
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
crj
Comamonas resistens
Pathway
crj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QMY55_05780 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crj03019
]
QMY55_05780 (pnp)
03016 Transfer RNA biogenesis [BR:
crj03016
]
QMY55_05780 (pnp)
Enzymes [BR:
crj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QMY55_05780 (pnp)
Messenger RNA biogenesis [BR:
crj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QMY55_05780 (pnp)
Transfer RNA biogenesis [BR:
crj03016
]
Prokaryotic type
tRNA degradation factors
QMY55_05780 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH_KhpA-B
DUF5813
KH-I_KHDC4-BBP
aRib
Motif
Other DBs
NCBI-ProteinID:
WHS66645
UniProt:
A0ABY8SV64
LinkDB
All DBs
Position
1276344..1278587
Genome browser
AA seq
747 aa
AA seq
DB search
MTMFNKVTKTFQWGQHTVTMETGEIARQASGAVLVNIDDTVVLATVVGSKIAKAGQDFFP
LTVDYIEKTYAAGKIPGSFFKREAKPSELETLTSRLIDRPIRPLFPEGFYNDVHVVIHTI
SLNPEVDADIAAMIATSAALAVSGLPFNGPIGAARVGYINGEYVLNPGQTQRKDSQMDLV
VAGTESAVLMVESEALQLPEEVMLGAVVFGHEQGKIAIDAIHDLVREGGKPAWDWTAPAK
DEALIAKVVELGEAKLRAAYQERNKQVRTLACRTAYADVKAALTEQGVAFDGVKVEGMLF
DIEARIVRSQILAGEPRIDGRDTRTVRPIEIRNSVLPRTHGSALFTRGETQALVISTLGT
ERDAQKIDALAGEFEDRFLFHYNMPPFATGEVGRMGSTKRREIGHGRLAKRALAACLPTK
EEFPYTIRVVSEITESNGSSSMASVCGGCLSMMDAGVPMKAHVAGIAMGLIKEDNKFAVL
TDILGDEDHLGDMDFKVAGTTNGITALQMDIKIQGITKEIMQVALAQAKEARMHILGKMQ
EAMGEAKTEVSSFAPKLYTMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIA
ATDGAKAEAAKLRIEQITAEVEIGKIYEGPIVKILEFGALVNLLPGKDGLLHISQIAHER
VEKVTDYLQEGQVVKVKVLETDDKGRVKLSMKALTERPAGMPEREPREPRGDREYRERAP
RQNREPRENREPRENRAAADEQQQQQQ
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaacaaagttaccaagactttccagtggggccagcatacggtcaccatg
gaaaccggcgaaatcgcgcgccaggcctccggcgccgtgctggtcaacatcgacgacacc
gtggtgctggccaccgtcgtgggttccaagatcgccaaggccggccaggacttctttccc
ctgaccgttgactacatcgagaagacctacgccgccggcaagatccccggcagcttcttc
aagcgcgaagccaagccttccgagctggagacgctgacttcgcgtctgatcgaccgtccc
atccgtcctctgttccccgaaggcttctacaacgacgtgcatgtggtcatccacaccatt
tcgctgaatcccgaagtcgacgccgacatcgctgccatgatcgccacttcggcggcgctg
gctgtgtccggtctgcctttcaatggccccattggcgctgcccgcgtgggttacatcaac
ggcgaatacgtgctgaaccccggtcagacccagcgcaaggattcgcagatggatctggtc
gtcgccggcaccgaatccgccgtgctgatggtggagtccgaagccctgcagctgcctgaa
gaagtgatgctgggtgccgtggtgttcggccacgagcaaggcaagatcgccatcgacgcc
atccatgatctggtgcgtgaaggcggcaagcccgcatgggactggactgctcccgccaag
gatgaagcgctgatcgccaaggtggtcgagctgggcgaagccaagctgcgtgccgcttac
caggagcgcaacaagcaggtgcgtaccctggcttgccgcacggcctacgccgacgtcaag
gccgccctgaccgagcaaggcgtggcgttcgacggcgtcaaggttgaaggcatgctgttc
gacatcgaggcccgcatcgtgcgctcgcagatcctggcgggcgagccccgtatcgacggc
cgcgacacccgtaccgtgcgccccatcgagatccgcaactccgtgctgccccgcacccac
ggctccgcgctgttcacgcgtggtgaaacccaggccctggtgatctccacgctgggtacc
gagcgcgacgctcagaagatcgacgcgctggctggcgagttcgaagaccgcttcctgttc
cactacaacatgcctccctttgccaccggcgaagtgggccgcatgggctcgaccaagcgc
cgtgaaatcggccacggccgtctggccaagcgcgctctggccgcttgcctgccgaccaag
gaagaattcccctacaccatccgcgtggtgtcggaaatcactgagtccaacggctcctcg
tccatggcttcggtctgcggcggctgcctgtccatgatggacgccggcgtgcccatgaag
gcgcatgtggccggtatcgccatgggtctgatcaaggaagacaacaagttcgccgtgctg
accgacatcctgggtgacgaagatcacctgggtgacatggacttcaaggtggccggtacc
accaacggcatcaccgccctgcagatggacatcaagatccagggcatcaccaaggaaatc
atgcaggtcgccctggctcaggccaaggaagcgcgcatgcacatcctgggcaagatgcag
gaagccatgggtgaagccaagaccgaagtctccagcttcgcgcctaagctctacaccatg
aagatcaaccccgagaagatccgtgacgtgatcggcaagggcggcgccaccatccgtgcg
ctgaccgaagagaccggcacccagatcaatatcgaggaagacggcaccatcaccattgcc
gccaccgacggcgccaaggctgaagctgccaagctgcgcatcgagcagatcacggccgaa
gtcgagatcggcaagatctacgaaggccccatcgtcaagattctggaattcggtgccctg
gtcaatctgctgcccggcaaggacggtctgctgcacatcagccagattgctcacgagcgc
gtggaaaaggtcaccgactacctgcaagaaggtcaagtggtcaaggtcaaggttctggaa
accgacgacaagggtcgtgtcaagctgtccatgaaggcgctgaccgagcgtcccgccggc
atgcccgagcgcgagccgcgtgaaccccgtggcgatcgcgagtaccgcgaacgtgctcct
cgccagaatcgcgaaccccgcgagaaccgcgagccacgtgaaaaccgcgcagccgctgac
gagcagcagcaacagcagcagtaa
DBGET
integrated database retrieval system
