Comamonas resistens: QMY55_06465
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Entry
QMY55_06465 CDS
T09688
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
crj
Comamonas resistens
Pathway
crj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QMY55_06465 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crj03021
]
QMY55_06465 (rpoD)
Transcription machinery [BR:
crj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QMY55_06465 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
SPO22
Motif
Other DBs
NCBI-ProteinID:
WHS66778
UniProt:
A0ABY8SUQ9
LinkDB
All DBs
Position
complement(1418432..1420852)
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AA seq
806 aa
AA seq
DB search
MPVSKSVKSKQAPEASAKPKTSKTSTSAAAPSKASTSKPAVKKSAATAAEAKKDTTVVTK
SQAELKAMADALLAQATPKRGRKKAAEDEDAAATPAVKKPAAKKTAAAKAPAASADAAKA
PAKRGRKPKAKDEDMDDADLSDIDSDLEGEVEEEVTAEASSAPAEKVKPLRMKISKAKER
ALMKEFGLDETVLTEEEMNTRRQRLKMLIKLGKTRGYLTHAEINDHLPDKLVDAETLEVV
ISMLNDMGVAVYEQTPDAETLLLNNTGQSATTEEEAEEEAEAALSTVDSEFGRTTDPVRM
YMREMGTVELLTREGEIEIAKRIEGGLMDMMEAISASPATIAEILTMAEEIREGKVVIST
VVDGFVNADENDDYVAEEDFDEYDEEDDDDGKGGSKALTKKLEELKNEALSRFDAMRELF
DKMHKVYDKEGYGTEAYMKVQKAITEQLMTIRFTAKTIEKLCDLVRAQVDDVRKKERELR
KIIVDKCGMSQEQFIKDFPPNLLNLEWVIKHANAGKPYSAVLERNIPPVQELQQNLIDLQ
ARVVVPLDELKSINKRMNNGERASRDAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISR
QHLQEFGFEPDASILAAKMEIPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDGNN
TAPIDAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIR
QIEAKALRKLKHPSRSDKLRSFIDSL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtttcaaagtccgtgaagtccaagcaggcccccgaagcttccgcgaagcccaag
acctctaaaacttccacttccgctgcagcgccctccaaggccagtaccagcaagcctgca
gtgaagaagagtgccgcaactgcggccgaagccaagaaagacaccacagtggttaccaag
tcacaagccgaactcaaagccatggccgatgcgctgctggcacaggcaacccccaagcgc
ggccgcaagaaggctgccgaagatgaagatgcagccgcaacgcctgcggtgaagaagcct
gccgccaagaagaccgctgcagccaaggctcccgctgcaagcgccgacgccgccaaggca
cctgccaagcgtggtcgcaagcccaaggccaaggacgaggacatggacgacgcagacctg
tcggacatcgacagcgatctggaaggtgaggtcgaagaagaagtgactgcagaagcctct
tccgctcccgccgagaaggtcaagcctctgcgcatgaagatcagcaaggccaaggaacgt
gccttgatgaaggaattcggcctggacgagaccgttctgaccgaagaggaaatgaacacc
cgccgtcagcgtctgaagatgctgatcaagctgggcaagactcgcggctacctgacgcac
gccgaaatcaacgaccacctgcccgacaagctggtcgacgccgagacgctggaagtcgtg
atctccatgttgaacgacatgggcgtggctgtgtacgagcagactcccgatgcggaaacc
ctgctgctgaacaacaccggccagtcggccaccaccgaggaagaagcggaagaagaagcc
gaagcggctctgtccaccgtggactccgaattcggtcgcaccaccgaccctgtgcgcatg
tatatgcgtgaaatgggcacggtcgagctgctgacgcgcgaaggcgaaatcgaaatcgcc
aagcgcattgaaggcggcctgatggacatgatggaagccatctcggcttcgcctgcgacc
atcgccgaaatcctgaccatggccgaggaaatccgcgaaggcaaggtcgtcatctccacc
gtggtggacggcttcgtcaacgccgacgaaaacgacgactatgtggccgaggaagacttc
gacgaatacgacgaagaagacgacgacgacggcaagggcggctccaaggcactgaccaag
aagctcgaagagctgaagaacgaagcgctgagccgcttcgacgccatgcgcgaactcttc
gacaagatgcacaaggtgtatgacaaggaaggctacggcaccgaggcatacatgaaggtg
caaaaggccatcaccgaacagctgatgaccatccgcttcacggccaagaccatcgagaag
ctctgcgatctggtgcgcgcccaggtggacgacgtgcgcaagaaggaacgcgagttgcgc
aagatcatcgtagacaagtgcggcatgtcgcaggagcagttcatcaaggacttcccgccc
aacctgctgaatctggaatgggtgatcaagcacgccaatgccggcaagccctacagcgcc
gtgctggagcgcaacatcccccccgtgcaggagctgcagcagaacctgatcgacctgcag
gcccgcgtggtcgttccgctggatgagctcaagagcatcaacaagcgcatgaacaacggc
gagcgcgccagccgcgatgccaagaaggaaatgatcgaggccaacctgcgtctcgtgatc
tccatcgccaagaagtacaccaaccgcggcctgcaattcctggacctgatccaggaaggc
aatatcggcctgatgaaggccgtggacaagttcgaataccgccgcggctacaagttctcg
acctatgcaacctggtggattcgtcaggccatcacgcgctccatcgccgaccaggcccgc
acgatccgcatccccgtgcacatgatcgaaaccatcaacaagatgaaccgcatctcgcgc
cagcacttgcaagagtttggcttcgagcccgatgcgtccatcctggcagccaagatggag
atccccgaggacaagatccgcaagatcatgaagatcgccaaggagccgatctcgatggaa
acccccatcggcgacgacgacgattcccacctgggcgatttcatcgaggacggcaacaac
accgcgcctatcgacgccgccatgcaggccggcctgcgcgacgtggtcaaggacatcctt
gacggcctgacaccacgcgaagccaaggtgttgcgcatgcgcttcggtatcgagatgtcc
accgaccacacgctggaagaagtgggcaagcagttcgacgtgacgcgcgagcgtatccgc
cagatcgaagccaaggcgctgcgcaagctcaagcacccctcgcgctccgacaagctgcgc
agcttcatcgactcgctgtaa
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