Comamonas resistens: QMY55_13215
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Entry
QMY55_13215 CDS
T09688
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
crj
Comamonas resistens
Pathway
crj03030
DNA replication
crj03430
Mismatch repair
crj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMY55_13215 (dnaE)
03430 Mismatch repair
QMY55_13215 (dnaE)
03440 Homologous recombination
QMY55_13215 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crj03032
]
QMY55_13215 (dnaE)
03400 DNA repair and recombination proteins [BR:
crj03400
]
QMY55_13215 (dnaE)
Enzymes [BR:
crj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMY55_13215 (dnaE)
DNA replication proteins [BR:
crj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QMY55_13215 (dnaE)
DNA repair and recombination proteins [BR:
crj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QMY55_13215 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
LTM
Motif
Other DBs
NCBI-ProteinID:
WHS63509
UniProt:
A0ABY8SK86
LinkDB
All DBs
Position
complement(2826240..2829773)
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRVNAMIKAAAEDGQVAMAITDFNNLFGGIKFYREGRSKGVKP
VLGAEIVMEGVGEAPASRIIVLVQSKQGYHNIAELLARGWTRNVVRDQAQHKWEWLQELG
EGLIVLSGAQAGPVGIALTRGDEKGAAEIAQRLASMFPHRFYIELQRAGRADDEPHVVAA
VKLASRLNLPVVATHPIQFFKPDDYESHEARVCIAEGEILGNAKRVRKFTRDQHFKTAAE
MEQLFADIPSAIENTVEIARRCSLTLVLGKPQLPNFPVPEGMTEAEFFRQESYQGLEERL
AHLYPDPAKRDAERPRYVERLEFELDTILKMGFPGYFLIVGDFIKWAKQNGCPVGPGRGS
GAGSLVAYVLKITDLDPLEYNLLFERFLNPERVSMPDFDVDFCQQNRDRVIEYVKQLYGR
DAVSQIATFGTMAARAAIRDVGRVLDMSYTFCDGISKLIPNKPGLHVTLKYPPNPPKEGD
KYTYAIKEEPILAERIEREEDVKTLIEMAQSLEGMTRNIGMHAGGVVIAPGKLADFCPLY
QQPGSTSAVAMYDKDDVEAVGLVKFDFLGLATLTILEIAREFIMKRHKGQENFAFENIPL
DDYPTYKLFSDGKTEAVFQFESRGMQQMLKEAKPSRLEDLIALNALYRPGPMDLIPSFIA
RKHGQEVVEYPHPLVEKVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKVE
EMVMHRGIFREGAAKNGIDEAKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKVHY
TAEFYCGNMTVEMDNTDKLKVLYEDALKMGITFEMPDVNRGVHRFEPVTDKVIRYGLGAI
KGTGQAAIEAIVAARNGVGTGPNGHETGPFKSLFDFCLRVDRSKLNKRTVEALIKGGAFD
SIDMNRASLLATLDTAFGFAATSIANADQGGLFDMMGDDALGSSTAEPPMADVLPWGVKE
KLMLEKTAIGFYLTGHLFDEVEAEVRRFVRTPIAEMRDSREPQVMAGIISGLRTINGQRG
KLSIFALDDKSATIEASIDEKAMAACAEVLKEDEFVVVSGRLQLDRFSGGLRMKVQQMWS
LADARCRFARYLQVSVGEHMPDVPALLCQFPAKVEETENGNIHHGVKVRLDLICRDERGS
ASCELALGESSRFYPSDAALAAWYGSVGTGQVKVVYD
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccatctgcgcctgcacaccgaattttccgtcgttgacggaaccaaccgcgtc
aatgccatgatcaaggcggctgccgaagacgggcaggtggcaatggccatcaccgacttc
aacaacctgtttggcggcatcaagttctaccgcgagggacgatccaagggcgtcaagccc
gtgctgggcgcggagatcgtcatggagggcgtgggggaggcgcctgcttcgcgcatcatc
gtgctggtgcagagcaagcagggctatcacaatatcgccgagctgctggctcgtggctgg
acgcgcaatgtggtgcgcgaccaggcccagcacaaatgggaatggctgcaggaactcggt
gaggggctgatcgtgctgtccggcgcgcaggccggccccgtgggcattgcgttgacccgt
ggcgatgaaaaaggcgcggccgagattgcccagcgtctggccagcatgttcccgcaccgc
ttctatatcgagctgcagcgtgcgggccgcgccgatgatgagccgcatgtggtggccgcc
gtgaagctggccagccgcctgaacctgcccgtggtggccacccaccccatccagttcttc
aagcccgacgattacgagtcccacgaggcgcgcgtctgtatcgccgagggcgaaatcctg
ggcaatgccaagcgtgtgcgtaaattcacgcgtgaccagcacttcaagacggctgccgag
atggagcagctgtttgccgatattcccagcgccatcgaaaacacggtggaaattgcgcgc
cgctgcagcctgacgctggtactgggcaagccccaactgcccaacttccccgtgcccgag
ggcatgacggaggccgagttctttcgccaggagtcctatcaaggcctggaggagcgcctg
gcccacctctatcccgatccggccaagcgcgacgccgagcggccgcgctatgtggagcgc
ctggagttcgaactggacaccatcctgaagatgggcttcccgggctacttcctcatcgtg
ggcgacttcatcaagtgggccaagcaaaacggctgtcccgtgggcccgggccgtggctcg
ggtgcgggttcgctggtggcctatgtgctcaagatcacggaccttgatccgctggaatac
aacctgctgttcgaacgtttcctgaaccctgagcgcgtgtccatgcccgacttcgacgtg
gacttctgtcagcaaaaccgtgaccgtgtcatcgagtacgtcaagcagctctatggccgc
gacgccgtgagccagatcgccaccttcggcaccatggccgcgcgtgcggccatccgcgac
gtgggccgcgtgctggacatgagctataccttctgcgacggtatctccaagctgatcccg
aacaagcccggtctgcacgtcacgctcaaatatccgcccaatccgcccaaggaaggcgac
aaatacacctacgccatcaaggaagagccgatcctggccgagcgcatcgagcgcgaggaa
gacgtcaagaccctgatcgagatggcacagagcctggagggcatgacccgcaatatcggc
atgcacgccggtggcgtggtgattgcgcccggcaagctggccgacttctgcccgctgtac
cagcagcccggcagcacctcggccgtggccatgtacgacaaggacgacgtggaggccgtg
ggcctggtgaagttcgacttcttgggtctggccacgctgacgattctggaaattgcgcgc
gaattcatcatgaagcgccacaagggccaggagaatttcgctttcgagaacattccgctg
gacgactacccgacctacaagctgttctccgacggcaagaccgaagccgtgttccagttt
gaatcgcgcggcatgcagcagatgctcaaggaggccaagccttcacgtctggaagacctg
atcgcgttgaacgccttgtaccgtccaggccccatggacctgattcccagcttcattgcc
cgcaagcacgggcaggaagtggtggagtacccgcacccgctggtggagaaggtgctcgcc
gaaacctacggcatcatggtctatcaggagcaggtgatgcagaccgcccaggttctgggt
ggctactcgctgggcggcgccgacttgctgcgccgcgccatgggcaagaagaaggtcgag
gaaatggtcatgcaccgcggaatcttccgcgagggtgccgccaagaatggcatcgacgag
gccaaggccgacgaggtgttcgacctgatggaaaagttcgcgggctacggcttcaacaag
tcgcacgcggctgcctactcgctgctggcttaccacacggcctggctcaaggtgcactac
acggccgagttctactgcgggaatatgaccgtggaaatggacaacaccgacaagctcaag
gtgctctatgaggacgcgctcaagatgggcatcaccttcgagatgcccgacgtgaaccgc
ggcgtgcaccgtttcgagcccgtgacggacaaggtcatacgctatggtctcggagccatc
aagggcacggggcaggctgctatcgaagccatagtggccgcgcgtaacggcgtgggcacg
ggccccaacggtcatgaaacaggtccgttcaagagcctgttcgacttctgcctgcgcgtg
gaccgcagcaagcttaacaagcgcacggtagaggcgctgatcaagggcggtgccttcgac
agcatcgacatgaaccgcgcctcgttgctggccacgctggatacggccttcggctttgcc
gccacctcgattgccaatgcggatcagggggggctgttcgacatgatgggcgacgacgcg
ctgggttccagcacggcagagccgcccatggccgacgtgctgccctggggggtgaaggaa
aagctgatgctggaaaaaacagccatcggtttttacctgaccggccatctgttcgatgag
gtcgaggcggaggtgcgtcgctttgtgcgcacacccatagccgagatgcgcgacagccgc
gaaccccaggtcatggccggcatcatcagcggcctgcgcaccatcaacgggcaacgtggc
aagctcagcatttttgcgctggacgacaaatcggccacgattgaagcctcgattgacgaa
aaagccatggccgcctgcgccgaagtgctcaaggaggacgagtttgtcgtggtttcgggc
cgcctgcagctcgaccgtttcagcggtggcctgcgcatgaaggtgcagcagatgtggagc
ctggccgatgcacgctgccgttttgcccgctatctgcaggtcagtgtcggcgagcacatg
cccgatgtgccggcgctgctgtgccagttcccggccaaggtcgaagagaccgaaaacggc
aatatccaccatggcgtgaaggtgcgcctggatctgatatgccgcgatgagcgcggctcg
gccagttgcgagctggcgctgggcgagagcagtcgcttctaccccagtgatgcagctctg
gctgcctggtatggctcggtgggcacgggccaggtcaaggttgtttacgattga
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