Comamonas resistens: QMY55_17845
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Entry
QMY55_17845 CDS
T09688
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
crj
Comamonas resistens
Pathway
crj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QMY55_17845 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crj03019
]
QMY55_17845 (pcnB)
Enzymes [BR:
crj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
QMY55_17845 (pcnB)
Messenger RNA biogenesis [BR:
crj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QMY55_17845 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF4049
Motif
Other DBs
NCBI-ProteinID:
WHS64349
LinkDB
All DBs
Position
complement(3838224..3839792)
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AA seq
522 aa
AA seq
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MIKTIIDKLLGKAPAAPRSRKPKFGKRDEVPVQVHGIDPNLVDRRAIDVVQTLKRSGFEA
YIVGGAVRDLLLGLRPKDFDVATNATPEQVKNLFRRAFIIGKRFRIVHVVYGRGRENEVI
EVSTFRAFLDNSAAEQVSGNERTSKNQLAGLKHAVDASGRVLRDNVWGPQDQDATRRDFT
INAMYYDPETQIVVDYHGGIADAKKKVLRMIGDPATRYREDPVRIIRAVRFAAKLNSKGF
KLEAKTAKPLVECEPLLNEVPQSRLFDEMLKLLQTGHAIASVAQLQELGLSRGIYPLLDV
VMERAGHPFVQAALMDTDRRVAEGKPVAPSFLLACVLWQDVKQGWEKRLGKGYHPFPALQ
ESIDEVFEQRIGDVSGRGKLAADMREIWVMQPRFDKRTGATPYSMVAQPRFRAGFDFMRL
RADIGEVEESLASWWQEFSQADDARRDDLIAQARDEHRARQRAQQQAAPKVHRVTKKKAE
GEGESSPLDQVAAEAEGDAPKKRRRRRRKPASGATPAAGGND
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccattattgacaagctgctgggcaaggcgcccgcagcaccccgctcgcgc
aagcctaagttcggcaaacgtgatgaagtgccggttcaggtgcatggcatagacccgaat
ctggtggaccgccgtgccatcgatgtggtgcagacgctcaagcgctcgggctttgaggcc
tatatcgtgggcggcgccgtgcgcgatctgctgctgggcctgcgtcccaaggactttgac
gtggcgaccaacgccacgcccgagcaggtcaagaacctgtttcgtcgtgccttcatcatc
ggcaagcgttttcgcatcgtgcacgtggtctatggccgcggccgtgaaaacgaggtgatc
gaagtctccaccttccgtgcttttctggacaacagcgctgccgaacaggtcagcggcaat
gagcgcaccagcaagaatcagctggcaggtctcaagcacgccgtggacgccagcggccgc
gtgctgcgcgacaacgtctgggggccgcaggatcaggatgccacgcgccgcgacttcacc
atcaatgcgatgtactacgaccccgaaacgcaaatcgtggtcgactatcacggtggcatc
gcagacgccaagaagaaggtgttgcgcatgatcggcgatccggccacgcgctaccgtgaa
gacccggtgcgcatcatccgtgccgtgcgctttgccgccaagctcaatagcaagggcttc
aagctcgaagccaagacggccaagcccctggtggaatgcgagccgctgctgaacgaggtg
ccgcaaagccgtctgttcgacgaaatgctcaagctgctgcagaccggccatgcgattgcc
tctgtggcgcaactgcaggagctgggtctgtcgcgcggcatctatccgctgctggacgtg
gtgatggagcgtgccggccatccgtttgtgcaggctgctctcatggataccgaccgccgt
gtggccgaaggcaagcccgtggctcccagcttcctgctggcctgtgtgctgtggcaggac
gtcaagcagggctgggaaaagcgcctgggcaagggctatcaccccttcccagcgctgcag
gagtcgattgacgaggtgttcgagcagcgtatcggcgatgtgtcgggccgcggcaagctg
gctgccgacatgcgcgagatctgggtcatgcagccgcgctttgacaagcgtacgggggct
acgccttactccatggtggcacagccgcgtttccgtgccggttttgacttcatgcgcctg
cgtgccgatatcggcgaggtcgaggaaagcctggccagttggtggcaggagttttcgcaa
gccgatgatgcccgccgcgatgacctgatcgcgcaggcgcgtgacgagcatcgtgcccgc
cagcgtgcccagcagcaggccgcgccaaaggtgcaccgcgtgacaaagaaaaaggccgag
ggggagggtgaaagcagcccgctggatcaggtcgcagcagaggctgaaggcgatgctccc
aagaagcgccgccgtcgccgtcgcaaacctgcttccggtgcaacccctgccgcaggcggc
aatgactga
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