Comamonas resistens: QMY55_20130
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Entry
QMY55_20130 CDS
T09688
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
crj
Comamonas resistens
Pathway
crj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QMY55_20130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
crj02022
]
QMY55_20130
02035 Bacterial motility proteins [BR:
crj02035
]
QMY55_20130
Two-component system [BR:
crj02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
QMY55_20130
Bacterial motility proteins [BR:
crj02035
]
Pilus system
Twitching motility proteins
QMY55_20130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_23
HTH_30
HTH_24
HTH_28
AAA_16
AAA_2
Sigma70_r4
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WHS64772
UniProt:
A0ABY8SNY5
LinkDB
All DBs
Position
4321155..4322651
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AA seq
498 aa
AA seq
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MNSLPTPPTSASILVVDDEPDLRTLYELTLLREGYRVETAGSVQDAAQLLLSRRFDVMIS
DMRLPDGTGMELLLQLREQARPERCIVMTAYGSAENAVDALRAGAFDYLTKPVDLRQFRQ
VVASAIQGIGAVPTPGVAPSMAVDAANSRPLQGDAALKALVGESPAMQGVKQRIAKVAKG
MAPVLVHGESGTGKELVARALHACSQRADGPLVAVNCGAIPENLLEAEFFGARKGSYTGA
TQDRPGYFQAAQGGTLFLDEIGDLPLAMQAKLLRAIQERKIRSLGSTQEEAVDVRIVSAT
HRDLAAQVQAGQFRQDLFYRLNVIEIALPALRERRGDLPDLCRALLAKLAHESGLHTPEL
DETSLAQIAQLELPGNVRELENVLHRAIALGDEGPLRLPPSMESCEATLSNQPSSSTLAP
KPPQAATADTPAELPQDLQAWLDEKERNILVQALQDNGFNRTATATRLGISLRQIRYRIE
RLGIDLPSEGNKHHGDNA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgaattccttgcccacaccccctacctccgccagcatcctggtcgtggacgacgagccc
gatctgcgcacgctctatgagctgaccctgctgcgcgagggttatcgcgtggaaacggca
ggctcggtacaggacgcggcgcagttgctgctgagcaggcgctttgacgtgatgatcagc
gatatgcgcctgcccgatggcaccggtatggagctgctgctgcagctgcgcgagcaggcc
cggcccgaacgctgcatcgtcatgaccgcctacggttctgccgagaacgcggtcgatgct
ctgcgtgccggggcttttgattacctgaccaagcctgtggatctgcgacagttccgccag
gtggtcgcttccgccattcagggtataggcgccgttcccacacccggtgtcgcacctagc
atggcagtggatgccgcaaacagccgccccttgcagggcgatgcggccttgaaggctctg
gtcggcgaatcccctgccatgcaaggcgtcaagcagcgcattgccaaggttgccaagggc
atggcacctgtgctggtccacggcgaatcgggtacaggcaaggaactggtagcccgtgcg
ctgcacgcctgcagccagcgcgccgatgggcctctggttgccgtcaactgcggcgccatt
cccgagaacctgctcgaagccgaattcttcggtgcacgcaagggctcgtacaccggcgcc
actcaggacaggcccggctatttccaggccgcccagggcggcaccttgtttctggacgag
atcggtgatctgccgctggccatgcaggccaagctgctgcgcgcgattcaggaacgcaag
atccgctccctgggcagcacgcaggaggaggccgtcgatgtgcgcatcgtcagtgccacc
caccgcgacctggctgcgcaggttcaggccggacagttccgccaggacctgttctatcgc
ctcaatgtgatcgagatcgccctgccggccctgcgcgagcgtcgcggcgacctgcccgac
ctctgccgcgcgctgctggccaagctggcccatgaatcaggcctgcacacccccgagctc
gacgaaaccagcctggcccagattgcccagctggagctgccgggcaatgtgcgcgagctg
gaaaacgtgctgcatcgcgccattgccttgggtgacgaagggccgctgcgcctgccgccg
tccatggagtcgtgcgaggcaacactctccaaccagccctcgtcatccacgcttgcgcca
aaaccaccgcaagccgcaacggccgacacaccagccgagctgccccaggacctgcaggcc
tggctcgatgaaaaagagcgcaacattctggtgcaggccctgcaagacaacggcttcaac
cgcaccgccaccgccacccgcctgggcataagcctgcgccagattcgctaccgcattgaa
cgcctaggcatcgacctgccctcggaaggaaacaagcaccatggcgacaatgcctga
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