Comamonas resistens: QMY55_20375
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Entry
QMY55_20375 CDS
T09688
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
crj
Comamonas resistens
Pathway
crj00300
Lysine biosynthesis
crj00470
D-Amino acid metabolism
crj01100
Metabolic pathways
crj01110
Biosynthesis of secondary metabolites
crj01120
Microbial metabolism in diverse environments
crj01230
Biosynthesis of amino acids
Module
crj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QMY55_20375 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QMY55_20375 (dapF)
Enzymes [BR:
crj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QMY55_20375 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WHS68015
UniProt:
A0ABY8SZX5
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All DBs
Position
complement(4378033..4378911)
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AA seq
292 aa
AA seq
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MQIRFTKMQGAGNDFVVLDETQGRLGLSSAQYRYLANRHFGVGADQILTVRPAPAEGVDF
EYVIHNADGGEVEQCGNGARCFARYVHDKGLTDKRVIRVHTLAGVIAPELHADGRVTVDM
GAPQLDPAKVPFIAEGLQPQMQGNAQKWPLALDESAQPATVWVAPVSMGNPHAVQVVEDV
DRAPVEAQGPLIEHHVRFPQRVNAGFMQIINRAEVKLRVYERGAGETLACGTGACAAVVA
GIGWGLLDARVDVHTRGGLLTIEWAGGAQDRVRMTGPAEFVFEGQIDIPETL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcgctttaccaagatgcaaggcgcgggcaacgactttgtcgtgcttgacgaa
acacagggccgactgggcctgagcagcgcccagtaccgctacctggccaaccgccatttc
ggcgtgggagccgaccagattctgaccgtgcgcccagcgcctgccgagggcgtggatttt
gaatatgtgattcataacgccgacggcggagaggtggagcagtgcggcaatggcgcgcgc
tgttttgcccgttatgtgcatgacaagggcttgaccgacaagcgcgtgatccgcgttcac
accctggccggcgtgatcgcgcccgagctgcatgcggatggccgcgtgaccgtcgacatg
ggggccccccagctggacccggccaaggtgcccttcatcgccgaaggcttgcagccccag
atgcagggaaatgcacagaaatggcctcttgcccttgatgagtctgcgcagccagctacg
gtttgggtagcgccagtgtccatgggcaacccccatgccgtgcaggtggtcgaggatgtg
gacagggcgccggttgaagcacagggtccgctgatcgaacaccatgtgcgttttccgcag
cgtgtgaacgctggattcatgcagatcatcaaccgcgcagaggtgaagctgcgcgtctat
gagcgtggagccggcgaaacgctggcctgcggcacaggcgcttgcgcggccgtggtggcg
ggcattggctgggggctgctggatgcgcgcgtggatgtccacacgcgcggtggcctgctg
accattgaatgggctggcggcgcgcaggaccgtgtgcgcatgaccggcccagccgagttt
gtttttgaaggccagatcgacatacccgagacgctatga
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