Comamonas resistens: QMY55_20885
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Entry
QMY55_20885 CDS
T09688
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
crj
Comamonas resistens
Pathway
crj00521
Streptomycin biosynthesis
crj00523
Polyketide sugar unit biosynthesis
crj00541
Biosynthesis of various nucleotide sugars
crj01100
Metabolic pathways
crj01110
Biosynthesis of secondary metabolites
crj01250
Biosynthesis of nucleotide sugars
Module
crj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
crj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QMY55_20885 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QMY55_20885 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QMY55_20885 (rfbC)
Enzymes [BR:
crj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QMY55_20885 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WHS64915
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All DBs
Position
complement(4495359..4495910)
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AA seq
183 aa
AA seq
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MKFTPLAIPDVFLIEPKVFGDARGFFLESFRQDLFNQATGTNFEFIQDNHSRSSKGVLRG
LHYQLPPHAQGKLVRVISGAVFDVAVDIRRSSPTFGQWVGAELSAENHRQLWIPPGFAHG
FVVLSDTADFVYKTTAYYAPESDRGLLWNDPDIAIAWPQLDIEFSLSEKDQKQPAFKQAE
LFD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcacgcctttggccattcccgatgtctttctgatcgagcccaaggtgtttggg
gatgcgcgcggcttttttctggaaagctttcgccaggacctcttcaaccaggccacgggc
acgaacttcgagttcattcaggacaaccacagccgcagcagcaaaggcgtgctgcgcggg
ctgcactaccagctgccgccccatgcccagggcaagctggtgcgtgtgatctcgggtgcc
gtgtttgatgtggccgtggatatccgccgcagctcgcccacctttggtcaatgggtgggc
gcggagctgagcgccgagaatcaccgccagctctggattccgccgggctttgcccatggc
tttgtggtgctcagcgacacagctgactttgtgtacaagaccacggcctattacgctccg
gagtcggatcggggcttgctctggaatgatccggacatagctattgcgtggccacagctc
gatatcgagttttccttgtccgagaaagatcagaagcagcccgcattcaaacaggctgag
ctgttcgattaa
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