Cylindrospermopsis raciborskii: L3I90_00230
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Entry
L3I90_00230 CDS
T08337
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_00230
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3I90_00230
Archaeal homologous recombinant proteins
L3I90_00230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-ProteinID:
UJS04741
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All DBs
Position
complement(49331..50575)
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AA seq
414 aa
AA seq
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MIKVLHLSDIHIGSGFSHGRINPNTGLNSRLEDFVNTLSLCIDRALSEPVDMVIFGGDAF
PDATPPPYVQEAFASQFRRLVDAHIPTVLLVGNHDLHSQGIGGASLNIYRTLGVPGFVVG
DSLTTHHIQTPNGKVQVITLPWLTRSMLMTRKETTGMSMAEVNQLLIEKLQVVLEGEVRN
LDPNLPTILLAHLMADNAMLGAERLLAVGKGFTLPASLLIRPCFDYVALGHVHCHQNLNK
SNDPPVVYPGSIERVDFSEEKEQKGYVMVELEKGKANWQFCPLPARIFRTIEVDLSPRDN
PQQTLLQAIAKHDLTGNVVRLVYKLRSEQLDVIENAVIHKALGDAHHYTIHPELVSQLAR
PRIPELNASSSIDPIEALRTYLNNREDLKDIATYMLEAAQELLGDDETMILVDR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagttctacacctttcagatattcatataggaagcggtttttcccacggacgt
attaaccccaacactggattaaactcccgcttggaggattttgttaataccctatcttta
tgtattgatcgggccctgtctgaaccagtagatatggttatatttggtggtgatgccttt
ccggatgctacccctccaccttacgtacaagaagcatttgccagtcagtttcgtaggttg
gttgatgcccatattccaacggttttattagttggcaatcatgatttacattcccagggt
ataggaggagcaagtcttaatatttaccgaactttgggagtacccggttttgtggtgggt
gatagtttgactacccatcatattcaaacccccaatggtaaggtacaagtaattactcta
ccttggttgactaggtctatgttaatgacccgcaaggaaactacgggaatgtctatggct
gaggttaatcaacttttgattgaaaaattacaagtggttttagaaggagaggtgagaaat
ttagacccaaatctgcccaccatacttttagcccatttgatggctgataatgctatgttg
ggtgcggaacgtttattagctgtaggtaagggttttactctgccagcttctttacttatt
agaccatgttttgattatgtggcattaggtcatgtccactgccatcaaaatctgaataaa
tccaacgacccacctgtggtttatcctggtagtattgagcgagtggattttagtgaagaa
aaagaacaaaagggttatgtcatggtagagttggaaaaaggtaaggccaattggcagttt
tgcccactacctgctcgcattttccgcaccatcgaggtggatttatcccccagagacaat
cctcaacaaacattattgcaggcgatcgccaaacatgacctaacagggaatgtagtcaga
ctagtttataaactgcgttcggaacaattagatgtaatagaaaacgctgttattcataag
gcgctgggggatgcacatcattatacgattcacccagaactagtgagtcaattagccaga
ccgcgaattcccgaattaaatgctagtagtagtattgatcccatagaggcattaagaacc
tacttaaacaatcgtgaagatttaaaagatattgccacatatatgttagaagcagcacaa
gagttattaggagatgatgagactatgattttggtagacagatag
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