Cylindrospermopsis raciborskii: L3I90_03450
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Entry
L3I90_03450 CDS
T08337
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_03450 (sbcC)
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3I90_03450 (sbcC)
Archaeal homologous recombinant proteins
L3I90_03450 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
Rad50_zn_hook
AAA_27
DUF1664
AAA_29
AAA_21
Golgin_A5
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
UJS05319
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All DBs
Position
760970..763987
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPVRLILKNFLSYRDATLDFMGLHTACICGPNGAGKSSLLESITWAIWGQSRANIEDDV
IYAGSQEVRVDFTFYNNLQKYRVIRTRARGATGILEFQLETPAGFRPLTGKGIRATQDLI
LQHIKLDYETFINSAYLRQGRADEFMLKGPAQRKEILAELLKLNQYDLLEDRAKDNSKQC
KGRVEELERSIHNIQLQLTDKETIQTQRATLETRLHHLQQQQTSDYQQLQDLQVVERQRH
DWETKLGVVQQQCQNLVPECDRLYQDGSVVKSQLQELDSILGQSEEIQAGYSGFQALQSQ
EESFTRKFEQHNLAISFKQAREQELGTRVQTIQLQIQQESVELKASEKQEQELQGCLHKS
KEVESALSSLSAAREHLNQMEQLQIQVTPLLQQRASLQSRIDRVYATLSAKLEGLENTRQ
QLQSKDSDFSRLQESATQLDKQIEELEKKRVYLQRVHEKGNDRRHVIERLQTHQTEYEKS
LGKLEQKIQLLQEPNALCPLCERPLDEHNWSRVVEKTQGEYKDTQEQFWQTRELLAVSDQ
EIQALRTEYQTISRQVAEYESLRQKKGELGAHLQAMIDDRERLKQLALEKESLQAQLQGD
YAPELQQELQEVDQHLQQLNYQEENHALARSEIERWRWAEIKQAQIKDAQKKIAQLAQIK
PKLVAKIEELQAQVLWEQTNSPIAEEIGRLAVHIAAIDYSHEAHQEIHKKVQGSQHWQLK
HQQLLSAQQQYPYLEKRLADLSSDLQQREALKQKLAMEMGEIEKQLASMVNPAEKIADLD
QKMVVRRREMDETITHLGRLEQKIHQLELLQNQYEQEKDQLAVCKKKQRVYQELAQAFGK
NGIQALMIENVLPQLEAETNKLLSRLSGSQLHVQFITQKLGSKSAKKGAKLVDTLEILIA
DTRGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQLLIIDEGFGTQDTEGCDRLI
ASINAIASDFACILTVTHIPHLKEAFQARIEVNKNQQGSHLSLSI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccagttcgactgattctaaaaaactttttgagttaccgtgatgcaactttagat
tttatgggattgcacacggcctgcatttgtggtcctaatggagcaggtaaatcttctttg
ttggagtctataacttgggcaatctggggtcaaagtcgtgccaacattgaggatgatgtt
atctatgctggatcacaagaggttagggttgattttactttctacaacaatttacaaaaa
tatcgggtaattcgtactcgtgcccgaggtgctacaggtattttggaatttcaattggaa
actcctgctggttttcgtcctcttacgggtaagggtatccgtgctacccaggacctgatt
ctccaacatattaagttggattatgaaacttttattaattcggcttacctccgccaagga
cgcgctgatgaatttatgctaaaaggacctgctcaacgtaaggagattttggcggagttg
ttaaagctcaatcagtatgatttgttggaggacagagctaaggataattctaagcagtgt
aagggaagggtggaagagttggaacgttctatccacaacattcaattacaattgactgat
aaggagacaattcaaacccaaagagcaactttggaaaccagattacatcatttgcaacaa
caacagacttctgattatcaacagttgcaagatctacaggtggttgaacgtcaacgtcac
gattgggaaactaagttgggggtagttcaacaacagtgtcagaatctcgttccagaatgc
gatcgcctgtatcaagatggttcagttgtcaagtctcaattgcaggagttagattctatt
ttaggtcagtctgaagaaattcaagctggttatagtggttttcaagctctacaatctcag
gaagagtcttttactaggaaatttgagcaacataatcttgctattagttttaaacaagca
cgagaacaggaactagggacacgagttcaaaccattcaactgcaaatacaacaggagtcg
gtagaattaaaggcctcggaaaaacaggagcaggaattacaagggtgcttacacaagtct
aaagaagtagaatctgcattgagcagtttatctgctgctcgtgaacatcttaaccagatg
gaacagttacaaatccaagtgactcccctcctacaacaacgagcaagtttacaaagtcgg
atagaccgggtttatgctactttgtcagctaaattggaggggttggaaaatactcgacaa
caactacaatcgaaagattctgacttttctcggttacaggagtccgctacacaactggat
aagcaaattgaggagttggaaaagaaacgtgtctatcttcaaagggtacatgaaaaagga
aatgatcgtcgccatgtaattgaacgtttgcaaactcatcaaactgaatacgagaaatct
ttgggtaagctggaacaaaagatacagctacttcaggagcctaatgctctatgtcccctc
tgtgaacgtcctttagatgagcataattggagtcgggttgtagagaaaactcagggagaa
tacaaggatactcaggaacaattttggcaaacacgagaattattggcagtgtctgaccaa
gaaattcaagcattaaggacggaatatcagacaatctcccgacaggtggcagaatatgag
tctttaaggcaaaaaaaaggagaattaggtgctcatctgcaagctatgatcgatgaccgg
gaaaggttgaagcaacttgctttagagaaggaaagtttacaggctcaattacaaggggat
tatgctcccgaactacaacaggaactccaagaagtagatcagcatttacaacaactaaat
tatcaggaagaaaatcacgctttagctagaagtgagatagagcgttggcgatgggcagaa
attaaacaggctcagattaaagatgctcaaaagaaaatagctcaactagcacagattaag
cctaaactagtagccaagattgaggagttacaagcacaagtgctatgggaacagactaat
tcaccaatagctgaggaaattgggagattagcagtgcatattgctgctattgattatagt
catgaagcacatcaggaaattcataaaaaagttcaagggagtcaacattggcaattgaaa
catcagcagttgttatctgctcaacaacaatatccttatctggaaaaaagactggcagat
ttgagtagtgatttgcagcaaagagaggcgctaaaacaaaaacttgccatggaaatgggc
gaaatagagaagcaattagcatctatggtcaatccagcagagaaaattgctgatttagac
cagaagatggtagttcgtcgtcgagaaatggatgaaactattactcatttaggcaggttg
gaacaaaagatacatcagttagaactgctgcaaaatcaatatgagcaagaaaaggaccaa
ttagcagtttgtaagaaaaaacagcgcgtttatcaggaattggcacaggcatttggtaaa
aatggtatccaagcactgatgattgaaaatgtgttaccacaactggaagcagagactaac
aagttactttctcggttgagtggtagtcagttacatgtacagtttattacccagaagttg
gggagtaaatcagctaagaaaggcgctaagttggtggacactttagaaattttaattgct
gacacaagaggtacaagagcttatgaaacttactctggaggggaggcgtttagaattaat
tttgctattcggttagcattggctaaattgctggcccagcgtgctggcgctgcactacag
ttgttaattatagatgagggatttggcacccaagatacggaaggatgcgatcgcctgatt
gcttctattaacgcaatagcgagcgattttgcctgtattttgactgtgacccatattccc
catctcaaggaagcatttcaggcgcgaatagaagtaaataagaaccaacagggttcccat
ttatccctttcaatttga
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