Cylindrospermopsis raciborskii: L3I90_04640
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Entry
L3I90_04640 CDS
T08337
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
crk03110
]
L3I90_04640 (clpB)
Chaperones and folding catalysts [BR:
crk03110
]
Heat shock proteins
HSP100
L3I90_04640 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_18
IstB_IS21
ATPase_2
Mg_chelatase
AAA_14
TniB
RuvB_N
AAA_28
Zeta_toxin
NBD_SMAX1
AAA_7
AAA_24
NACHT
DNA_pol3_delta2
AAA_23
Torsin
Sigma54_activ_2
UPF0242
Motif
Other DBs
NCBI-ProteinID:
UJS05530
LinkDB
All DBs
Position
complement(1049068..1051743)
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AA seq
891 aa
AA seq
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MQPTDPNKFTDTAWDAVIKSQDIVRAYQQQQLEVEHLILAILETSSAVTSGILTRAEIDP
IRLQEQLEAYTKRQPKVGKTDQLYLGRSLDLLLDRAEEIRGRIKDGEISEGHILLALAED
ERVGRRIFKGLNIDISKLESAVQTVRVTQKVSGKDNGSGDGSEPALKRFGQDLTEQAKAG
KLDPVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRMINGDVPESLKNR
QLITLDIGSLIAGAKYRGEFEDRLKNVLREVTESNGQVVLFIDELHTVVGAGSNQQGAMD
ASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPTVENTISILRGLK
ERYEVHHNVKIADSALVAAATLSARYIADRFLPDKAIDLVDEAAAKLKMEITSKPSELET
IDRRLMQLEMEKLSLSGEEKATAPTRERLDRIEQEISNLTTKQQKLNEQWQGEKQLLEAI
SSLKKEEDALRVQIEQAERDYDLNKAAQLKYGKLEGVQREREIKETQLLEIQHQGSTLLR
EQVTEADIAETVAKWTGIPVNRLLESERQKLLKLEHHLHERVIGQEEAVLAVSAAIRRAR
AGMKDPSRPIGSFLFMGPTGVGKTELARALAQFLFDSEDALVRLDMSEYMEKHSVSRLVG
APPGYVGYEEGGQLSETIRRHPYSVVLLDEVEKAHGDVFNILLQVLDDGRITDSQGRVVD
FRNTVIVMTSNIGSEYIIDISGDGDKHELMRNRVMDSLRSHFRPEFINRIDDLILFHTLN
RSEMGQIIRIQLQRVEKLLKEQKICLNITDNACDYLVEIGYDPVYGARPLKRSIQREIEN
PLATKILENSFVAGDVIVIDKGENGLTFFKKQENLPSPINPLELVTGSRPQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctacagatccaaataaatttactgacacagcatgggatgctgtaattaaatct
caagatatagtccgtgcttatcaacaacaacaattagaagtagaacacctaattttagcc
attctagaaacttctagtgcggttacttcgggtattttgactcgcgctgaaattgatcca
attagattacaagaacaattagaagcctacactaaacgccaaccgaaagtgggaaagacg
gatcaactctatttagggcgcagtttagatttactcctggaccgagcagaggaaattcgc
gggagaattaaggatggggaaatctctgaaggtcatattttattagctcttgcagaagat
gaacgggttggtagacggatctttaaaggtttaaatattgatatttctaagttagaatct
gctgtccaaactgtccgtgtgactcaaaaggtttctggaaaagacaatgggtctggggat
ggttccgaaccagcactaaaacgttttgggcaagatctaactgaacaagcaaaagctgga
aaattagatcctgttattggtcgtgatgatgaaattagacgggtaattcaagtcttatcc
agacgtagtaaaaataacccggttcttattggtgaaccaggggtgggtaaaacggcgatc
gctgaagctctggcccaaagaatgattaatggcgatgttcctgaatctctgaaaaatcgt
cagttgattaccctggatattggcagtttaattgctggtgctaaatatagaggtgaattt
gaagacagattaaaaaatgtcctccgggaggttactgaatctaatggtcaggtagttttg
tttattgatgagttacatacagtggtgggagctggttccaatcaacagggagctatggat
gctagcaatctcctcaaacctatgttagctcgtggtgaacttagatgtattggcgcaact
actttagatgaatatcgcaaatatatagaaaaagatgctgctttagaacgaaggtttcaa
caggtttttgtggatcaacccacggtagaaaacactatttctattttgcgcggtcttaaa
gaacgctatgaagtccatcataatgtgaaaattgccgattccgctttggttgctgcagct
actttatcagctcgttatattgcagatcggtttttacctgataaggccattgatttagtt
gatgaagcagcagccaagttaaaaatggaaatcacctccaaaccctcagaactggaaacc
attgacagacgtttaatgcagctggaaatggaaaaattgtccttgtcgggagaagaaaaa
gctaccgctcctaccagggaacgattggacagaattgaacaggaaatctctaatttaact
actaagcaacaaaaattgaatgaacaatggcaaggagaaaagcagttattagaagccatt
agtagtttgaagaaagaagaagatgcactcagggtacaaattgagcaagcggaaagagat
tatgatttaaataaagctgctcaattaaaatacggcaaactggaaggggtgcaaagagaa
cgagaaattaaagaaacccagttattagaaattcaacatcagggttctactctattaaga
gaacaggtcacggaagcggatatcgcagaaacagtcgctaaatggactggtatacccgtt
aatcgtctgttggaatcggaacgtcagaaactactcaaactggaacatcatctccatgaa
agggtgattggtcaagaagaagctgtactcgcagtatcagctgctattcgtcgtgcccgc
gcgggtatgaaagacccatcccgtcccataggttcctttttgtttatgggcccaaccgga
gtggggaaaaccgaacttgctcgtgccctggctcaatttctgtttgattccgaggatgct
ttagttaggttggatatgtccgaatatatggaaaagcattctgtctcccgtttggtgggc
gctcccccaggatatgttggttatgaagagggtggtcagctctcagaaactattcgtcgt
cacccctattctgtagttttgttggatgaggtggaaaaagcccatggcgatgtatttaat
atcttactccaggtcttagacgacggaagaattactgatagtcagggtagagtggtggat
tttcggaacactgttatagtgatgactagtaatattggtagtgaatatatcattgatatt
tccggggatggggataagcacgaactgatgcggaacagggtaatggatagtttgcgatcg
cattttcgtcctgaatttattaatcggattgacgacctaattttattccacaccttgaat
cgttctgagatgggtcagattattcgcattcaattgcaaagggtggagaaattattaaaa
gaacagaagatctgtttaaatataaccgacaatgcctgtgattatttagtagaaatcggg
tacgatccagtatatggtgcccgtccattaaagaggtcaatccagcgggaaatagaaaat
cccctagcgaccaagatattagaaaacagctttgttgctggggacgtaattgttatagac
aagggggaaaatggactgacattttttaaaaagcaggaaaatttgccgtctcccattaat
ccccttgagttggttacaggatctcgccctcaataa
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