Cylindrospermopsis raciborskii: L3I90_06355
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Entry
L3I90_06355 CDS
T08337
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk03420
Nucleotide excision repair
crk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3I90_06355 (pcrA)
03430 Mismatch repair
L3I90_06355 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_06355 (pcrA)
Enzymes [BR:
crk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3I90_06355 (pcrA)
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3I90_06355 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L3I90_06355 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
ResIII
AAA_30
Terminase_6N
DUF1978
Motif
Other DBs
NCBI-ProteinID:
UJS06318
LinkDB
All DBs
Position
1409778..1412105
Genome browser
AA seq
775 aa
AA seq
DB search
MNTNNDFTSQLNFSQRIAVEHYCGPLLVVAGAGSGKTRALTYRIANLILQNRVHPENILA
VTFTNKAAREMKDRIQRLFADQFAINQYGQKLDLLPAQQQSEVISSVYRTYIKNIWCGTF
HSLFSRILRFDVEKYQDEKGRHWQKNFSIFDESDVQTLIKEIVTKQLNLDSKKFDPKSVR
YAISNAKNQGLSPREFEEQQPNYRGRVIGEVYNLYQDQLAANNSLDFDDLILVPTRLFGQ
NEQVLGYWHNKFRHILVDEYQDTNRTQYELLRLLVTNGECRKNQWNWDNRSVFVVGDADQ
SIYSFRMADFTILLEFQQDFGDGLDDDDTRTMVKLEENYRSCENILQAANELIENNTERI
DKILKPTRDVGESIYFHKADDEVAEADFVINQIRNLTTNNPDINWGSFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDVIAYLRAINNPADTVSLLRVINTPRRGIGKST
IDVLINASQQLGTTLWEILSDETSVNTLTGRAAKSVTSFTSMIKKWQTTQVPASEVLEGI
LEDSGYLRDLMDQGTDEADNRISNVKELYNAVSQFQDENKGSDISLQAFLQSAALSSDLD
DLSETRDVVSLMTLHASKGLEFPIVFLVGLEQGLFPGYRSLQDPKALEEERRLCYVGITR
TQERLYLSHARERRLYGSREPALPSQFLGELPQHLLTTKSKIRAARSTKSTTITPETSGE
TNNWRVGEQVLHKAFGKGVITHVFGSDEKISLAIKFTSLGQKIIDPKVAQLQKIN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ataaacacaaataatgactttactagtcagctcaactttagccagcgtatagcagttgag
cattattgcggtcccttactagttgttgctggtgcaggttcaggtaaaacccgcgctcta
acctataggattgctaatttaattttacaaaaccgtgtgcaccccgaaaacattttagca
gtaactttcaccaataaagctgcaagggaaatgaaagaccggatccaaagattattcgcg
gatcaatttgccataaatcaatatggtcagaaattagatttattgcccgcacaacaacaa
agcgaggtcatatccagtgtttaccgtacctacattaaaaacatctggtgtggaaccttc
catagtttattttcccggattttgaggtttgatgttgaaaaatatcaagacgaaaagggt
cgacactggcagaagaacttttctatctttgatgaatctgatgtacaaactttaattaaa
gaaattgtcacaaaacaacttaacctagacagtaaaaagttcgaccctaaatccgttagg
tatgccattagtaatgctaaaaaccaaggtttatcaccacgagaatttgaagagcaacaa
cctaactatcgtggtcgagtaattggggaagtttataacctttatcaagatcaattagcg
gccaataacagtttggattttgatgacttaattctagttcccactagactatttgggcaa
aatgagcaagttttgggctattggcataacaagttccgtcatattttagtagatgaatat
caggacaccaatcggactcaatatgaactactacgtttattagttacgaatggtgaatgt
cgcaaaaaccaatggaattgggacaatcgttccgtgtttgtggttggtgatgcagaccag
tcaatttatagttttaggatggctgattttaccattctattggagtttcaacaggatttt
ggagatggtttagatgatgatgacaccaggactatggtgaaactagaggaaaactatcgc
tcctgtgaaaatattctgcaagctgctaatgaactgattgaaaataataccgaacgcatt
gataaaatcctcaaacctacgcgagatgtgggcgagtctatttattttcataaagccgat
gatgaagtcgctgaagcagattttgttatcaatcaaattcggaatttaacaactaataac
cctgatattaattggggaagttttgccattctctatcgcactaatgcccaatctcgaccc
tttgaggaactgctggtaaaatatcaaatcccctacaccgtggtgggaggcatgaagttt
tatgaccgaaaggaaatcaaagatgttattgcctatttaagagcaattaataatcccgca
gatacagtaagtttattaagggtcattaatactcctcgacgaggtatcggcaagtctact
atagacgttttgattaatgcttcccaacaattgggtactaccctgtgggagatattgagt
gatgaaacttctgtaaacaccttgaccggacgtgcggcaaaatctgtaactagttttact
agcatgattaaaaaatggcaaactactcaagttcctgcatcagaagtcttggaaggaatt
ctggaagattctgggtacctccgggatttaatggaccagggaacagatgaagctgataat
agaatcagtaatgttaaggaactatataatgctgtatcccagttccaagacgaaaacaag
ggcagtgatatttctttacaagcatttttgcaaagtgcagcattaagttcagacttagac
gatttaagcgaaaccagggatgtggtttctttgatgaccttgcacgcttctaaggggttg
gagttccccatagtgtttttagttggtttagagcagggactatttcccggttatcgttct
ctacaagatcctaaagctttagaagaagaaagaagattatgttatgtgggaatcacccgt
acccaagagcgattgtacctgtcccatgccagagaaagaaggttatatggctctagagaa
ccagcattaccatcacaatttctgggagaactaccccagcacctattaaccactaagtca
aaaatccgtgctgctaggtctactaaatccacaacaatcacgccagaaacttctggagaa
actaacaactggcgtgttggtgaacaagtactgcacaaagcttttggcaaaggtgtaatt
actcatgtttttggcagtgatgaaaaaatatccctggcaattaaatttaccagtttgggt
caaaaaattatcgatcccaaggtagcacaactgcagaaaataaactaa
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