Cylindrospermopsis raciborskii: L3I90_06910
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Entry
L3I90_06910 CDS
T08337
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk03030
DNA replication
crk03430
Mismatch repair
crk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3I90_06910
03430 Mismatch repair
L3I90_06910
03440 Homologous recombination
L3I90_06910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crk03032
]
L3I90_06910
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_06910
Enzymes [BR:
crk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3I90_06910
DNA replication proteins [BR:
crk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3I90_06910
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3I90_06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DnaA_N-like_STI
DNAX_ATPase_lid
AAA_30
RuvB_N
AAA_16
DNA_pol3_delta_C
AAA_19
AAA_5
Herpes_Helicase
AAA_24
RCF1-5-like_lid
AAA_18
PIF1
AAA_14
AAA_28
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
UJS05943
LinkDB
All DBs
Position
complement(1551572..1553548)
Genome browser
AA seq
658 aa
AA seq
DB search
MSYEPLHHKYRPKSFAELVGQEAIATTLTNAISLVKIAPAYLFTGPRGTGKTSSARILAK
SLNCLQTGHPTPTPCGVCDTCQGITKGYSLDVIEIDAASNTGVDNIRELIEKAQFAPVQC
RYKVYVIDECHMLSAAAFNALLKTLEEPPKHVVFVLATTDPQRVLPTIISRCQRFDFRRI
QLEAMVKHLSKIAYNENIPISQDAITLVAQISQGGLRDAESLLDQLALLPGEVSPEQVWD
LVGSVSEKDLFALLQAIAQNDSEKVLDHTRNILDRGREPLIILQNLGAFYRDLLIAKTAS
SRQDLVSCTQETWQQLVSFAAKLDITFILRGQQQLRTAEVQLKSTTQPRLWLEVTLLGML
PITQSSMVAPSSPSVYPATIQNQNGINYNVPPSPIYKQAHQQATPNLVSSSSSLPTHNPP
PNYLEQATSSSSEAIPPSSEHDLNQIWYQVLGNLQPASRREMLRQMSQLLEFDGNLAKIG
IKQAWYEKGKSDLGIIQNAFHQTFQRHIQIQLEKTNSGSTTRRNSIPEDSTRVYQSLTTP
TYQPAPQPTPSPKIETVHTVVNNPASNPPLVNKLTPNPSTPSPQHNREPEPIVITNQLPK
SNGSVSNQDDSQVAKAAKSLAEFFSGQITQLTDDNFDLAEIGASMDSDLEVYNLDDYE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgagcccctacatcataagtatcgccccaagagttttgctgaactggttgga
caggaagcaattgctaccacgctaacaaatgctattagtttggttaagattgctccagct
tatttatttacaggtcccagaggtacagggaaaacttccagtgcccggattctagctaaa
tcattaaattgtctccaaactggtcatcccactcctaccccctgcggtgtatgtgacact
tgtcaaggcattaccaagggttattccctcgacgtgattgaaattgacgctgctagtaat
acgggtgtagataatattcgcgaactaatagaaaaggcccaattcgcccccgtacagtgt
cgatataaggtttatgtaattgatgagtgtcacatgttaagtgcagcagcatttaatgca
ctacttaaaaccttggaggaaccacctaaacacgtagtttttgtcctggctacaactgac
cctcaaagagtattgccaactattatttcccgttgtcaaagatttgactttcgccgaatt
cagttggaagcaatggtaaaacatttatctaaaatcgcttataatgaaaatatccctatt
tcccaagacgctattaccctagtcgcccaaatatctcaggggggtttacgagatgctgaa
agtttattagaccaattggctttactacccggagaagtttccccagagcaggtttgggat
ctagtcggatccgttagcgaaaaggacttatttgccctattacaggcgatcgctcaaaat
gatagtgagaaggtattagatcacacgcgcaatattttagacagaggtagagaaccccta
attattctgcaaaacctgggggctttttaccgagatttactgatagctaaaactgcctct
agccgtcaggatctagtgagttgtactcaagaaacatggcaacaattagttagctttgca
gctaaattagacataacatttattttacgtggacagcaacaattaagaacagccgaggtg
caattaaagagtaccacccagccacgtttatggctagaagtgacactactgggaatgcta
cccattacccagagttccatggtagctccatctagcccatcagtctatccagcgactata
caaaaccagaatgggattaactacaatgtaccaccatcccctatttataaacaagcccat
caacaagcaacccctaatttagtatccagttcttcatcactacccacccataatcccccc
cctaattatttagaacaagctacatccagctcatcagaagcaataccaccatcatccgaa
cacgacctaaatcaaatttggtatcaagtgctgggcaatcttcaaccagcatccaggaga
gaaatgctccgtcagatgagtcaactattagaattcgatggtaatttagccaagattggc
attaaacaagcatggtacgagaaaggtaaatccgacctagggattattcaaaatgccttt
catcagacctttcagcgtcatattcagattcagttagaaaagacaaattccggtagcacc
accagaagaaattccataccagaagattcgacccgtgtttatcaatcactaaccacacca
acatatcaaccagcaccacaaccaaccccatcacccaaaattgaaacagttcacacagta
gttaataatccagctagtaacccaccactagtcaataagttgacgcctaatccaagcact
ccatcccctcaacacaacagggaaccagaacccatagtcataaccaatcaattacctaaa
tctaatgggtcagtttccaaccaggacgacagtcaagtagctaaagcagctaaaagtttg
gctgaattcttctcgggacaaataactcagctcacagatgacaactttgacctagcagaa
attggtgcatcaatggatagcgacctagaagtatacaatctggatgactatgagtag
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