Cylindrospermopsis raciborskii: L3I90_08050
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Entry
L3I90_08050 CDS
T08337
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3I90_08050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crk02000
]
L3I90_08050
Transporters [BR:
crk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
L3I90_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
AAA_29
PRK
Mg_chelatase
RsgA_GTPase
AAA_5
NB-ARC
AAA
RNA_helicase
NACHT
AAA_33
ATP-synt_ab
tRNA_lig_kinase
AAA_18
TsaE
NPHP3_N
AAA_7
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
UJS06153
LinkDB
All DBs
Position
complement(1795487..1797124)
Genome browser
AA seq
545 aa
AA seq
DB search
MTESLLNIQNLCVAYPQDYDQTPIWAVNDVSFSLKPGEKIGLVGESGCGKSTIGRAIMRL
LPDHSRVQGQVNFRESSVLNLTPAQMRQFRGEAVALVFQDPMTRLDPLMTISEHCLETLA
AHSPQLTKKQAKERVLATLEKVKIPGSRWSQYPHEFSGGMRQRVAIALALLLNPKLIIAD
EPTTSLDVTVSAQILQELTRLCAEDNMGLLLISHDLAMVAEYCDRIGVMYQGKIVEMGKT
ESVFKQPQHEYTQSLLRAALHIQQEPVGVGEEEKKENPILKITELQQYYSIEPNFLERLF
QSQQQTIKAVDGINLELYPGEILGLVGESGCGKSTLSRTILQLIPPTGGKVEFLGQELTR
LSREEVRSFRREIQMIFQDPHACLNPAMTVGESIADPLLIHKIARGKQAEEEVVWMLEKV
GLTPWQTYYRRYPADLSGGQQQRVAIARALITRPKLVICDEPVSMLDASVQTQVLDLMLQ
LKAEFDLTYLFITHDLWLARFLCDRIAVMNSGKIVELGKTKEIFSHPQHPYTQTLLGAAP
LLARV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatccctattgaatattcaaaatctctgtgtagcttatcctcaagattatgac
caaactccaatctgggcggttaatgatgtatcctttagtctaaaaccaggagaaaagatt
ggtttggtgggtgagtctggttgtggtaaatctactattggtcgggcaattatgcgatta
ttgcctgaccatagtcgggttcaaggtcaggtaaattttcgtgagagttcggtgttaaat
ttaactcctgctcaaatgcgacagtttcgaggtgaagcggtggctttggtgtttcaagat
cctatgaccaggttagacccactaatgactattagtgaacactgtttggaaaccttggct
gcacattcaccacaactgactaaaaaacaagctaaggaaagagttttggctaccttagaa
aaagtaaaaattcctggaagtcgttggagtcagtacccccatgagtttagtggaggaatg
cgtcaaagagtagctattgctttagctttgttactcaatcccaagttaattattgcggat
gaaccaacaactagtttagacgtaactgtttctgcccagattttacaagaactaactaga
ctgtgtgcagaagataatatgggcttgttgttgatttcccatgatttagcaatggtagca
gaatactgcgatcgcattggggtgatgtaccagggtaaaatagtggaaatgggtaaaaca
gagagtgtatttaaacaaccacagcatgaatacacccaatctttattaagagcagctcta
cacattcagcaagaaccagtaggtgtgggagaagaggagaaaaaagaaaatcccatcctt
aaaatcacagaattacaacagtattatagtatagagccgaattttctagagcgattattt
cagagtcaacagcaaacaatcaaagcagtagatggcattaacctagaattatatccagga
gagatattaggtctggtgggagagtcaggttgtggtaaaagtaccctatctagaaccatt
ttacaattgattcctcccacgggtggaaaagtggaatttttagggcaagaattaaccaga
ttatcccgtgaagaagttcgcagtttccgcagggaaattcaaatgatatttcaagatccc
catgcttgtttaaatccagctatgaccgtgggagaaagtatagcagatcccctattaatt
cacaaaatagcccgtggaaaacaggccgaagaagaggttgtatggatgttagaaaaagtg
gggttaactccttggcaaacttattatcgccgttatccagcagatttatcggggggacaa
caacaacgggtagccatagcgcgagctttgattacccgccctaaattagtgatctgtgat
gaacctgtgagtatgttggatgctagtgtccaaacccaggttttggatttaatgttacaa
ttaaaggcggaatttgacctaacttacctatttattacccatgacttatggttggctagg
tttttgtgcgatcgcattgctgtaatgaatagtggtaaaatagtagagttaggaaaaacg
aaggagatattttcccatccccagcatccttacacccaaactctgttgggtgctgcacca
ttattagctagggtttaa
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