Cylindrospermopsis raciborskii: L3I90_08625
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Entry
L3I90_08625 CDS
T08337
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crk03032
]
L3I90_08625
03036 Chromosome and associated proteins [BR:
crk03036
]
L3I90_08625
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_08625
DNA replication proteins [BR:
crk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L3I90_08625
Chromosome and associated proteins [BR:
crk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L3I90_08625
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L3I90_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Pox_C4_C10
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UJS03207
LinkDB
All DBs
Position
complement(1916535..1916819)
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AA seq
94 aa
AA seq
DB search
MNKGELVDAVAEKANVTKKQADAVLSAAIDTIVEAVASGDKVTLVGFGSFESRDRKAREG
RNPKTNEKMEIPATRVPAFSAGKLFREKVAPPKE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaattagtagatgcagtggccgaaaaagccaatgtgaccaaaaaacaa
gcggatgctgtcctcagtgctgccattgacactattgttgaagcggttgcttcaggtgat
aaggttaccttggttggttttggttcttttgaatcacgggaccgtaaagctcgtgaaggt
cgtaaccctaaaactaatgaaaaaatggaaataccagctacgagggttcctgctttctcc
gctgggaaactatttagagaaaaggtagcacccccaaaagagtag
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