Cylindrospermopsis raciborskii: L3I90_09935
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Entry
L3I90_09935 CDS
T08337
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk00550
Peptidoglycan biosynthesis
crk01100
Metabolic pathways
crk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L3I90_09935 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
L3I90_09935 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
crk01011
]
L3I90_09935 (mrdA)
Enzymes [BR:
crk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
L3I90_09935 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
crk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
L3I90_09935 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UJS03447
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All DBs
Position
complement(2282450..2284243)
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AA seq
597 aa
AA seq
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MITLPPLPRTVNNQKSDRTVGRGPQSIYLILFTLLMLSGITARLVYLQIIQGPKMRVRAE
SNRVRIIPKQPERGNIFDRNGKLLATTRYPRSVYLWPMTHTKPSWSVVGPRLSKILNIPQ
VDMEDKLEEAGAYSSSLVRIARHLNEAQITALKEYATELPNVEINTDAVRYYPHGKILAH
VLGYTRELTAEQLKKRRSEGYRLGDVIGQMGVEKAHEKTLRGEWGGQQVEVDGAGRPLRV
LGQKEAKAGNDLHLTIDLDIQKAAEKALGRRNGSIIALNPNNGEVLAMVSHPTFDPNVFS
KQRLSQRDWESVQGADHPLVNRALSAFPPASTFKIVTTAAAIESGKFAPNTVLQTYGSLT
IGGTRFGEWNHAGFGPLGFVGAMQWSSDTFFYQIGKGIGGPTLIEWTRKYGFGKKTGFDF
VTEEARGLVPDDNWKQKAWKIPWSIGDTINMTIGQGALLTTPLQVAVMFAVPANDGYRVK
PHLIKDNGDAKKWRDSLNMKPITIKILRDGLRKVVSEGTGKVLNKPTIPPVAGKSGTAEA
WRNKVKENHAWFGAYAPADKPEIVIVAFAEHSGGGGGSVAAPMILEILEDYFSRKRK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgattacattaccaccattaccacggacagtaaacaatcaaaaaagtgaccgcactgtt
gggcgtggtccacaatccatatacttaatactattcaccttgttaatgctctctggtatc
actgctcgtttggtttacttacaaatcattcaaggacccaaaatgcgggtgcgcgcagaa
tctaaccgcgtgcgaataattcccaaacaaccagaaagaggaaatatttttgaccgtaat
ggcaaactattagctaccacccgctacccaagatccgtttatttgtggcccatgacacat
actaaaccatcttggtctgttgttggccctcgtttatcgaaaattctgaatatcccccag
gtagatatggaagataagctggaagaagctggagcttattcttcttctctagttcgtatt
gctcgtcatttaaatgaagctcaaattacagctttaaaggaatatgccacggaattacca
aacgtagaaataaataccgatgctgttagatactatccccatggaaaaattttagctcat
gtgcttggctatacacgagaattaacagcagagcaactgaaaaaacgtaggtccgaaggt
tatcgtctgggtgatgtgattggtcagatgggggtggaaaaagctcacgaaaaaacactg
cgaggagaatggggtggtcaacaggtagaagtggatggagctggtagacccctacgggtg
ttaggtcaaaaagaagctaaggcaggtaatgatttacacttaaccatagatttagacatt
caaaaagcagctgaaaaagctttaggtaggcgtaatggctcaataattgctcttaatcct
aataatggtgaagtgctggccatggtgtcccatcctacttttgatccgaatgttttctcc
aaacaaagactttctcagcgagactgggaaagtgtgcagggtgcggatcaccctctagtt
aatagagctttgagtgcgtttccccccgctagtacctttaaaattgtgaccactgcagcg
gccatagaatcaggcaagtttgctcctaatactgtgttacaaacctatggttctttaact
attggtggaactagatttggggagtggaatcatgcgggatttggcccccttggttttgtc
ggtgcaatgcagtggagtagtgatacttttttctaccaaattggcaaaggtattggtggt
cccacattgattgaatggactcgtaaatatggatttgggaaaaaaaccggttttgatttt
gtcacagaagaagctaggggtttagtacctgatgacaattggaaacagaaggcttggaaa
attccctggagtataggtgacactattaatatgaccatcggacaaggtgcgcttctgact
acacctttacaagtggcagttatgtttgccgtacctgctaatgatggctacagagttaag
ccacatttgataaaagataacggagatgctaaaaaatggcgtgattcattaaatatgaag
cccataactattaagatcctacgagatggtttacgaaaggtagtgtctgaaggtacaggt
aaggtcttaaataaacctaccattcccccagtagctggtaaaagtggtactgcggaagca
tggaggaataaggtgaaagaaaatcatgcctggtttggtgcttatgcacctgcagacaaa
ccagaaattgttatcgtcgcttttgcggaacattctggtggtggtggtggtagtgttgct
gcaccgatgattttggaaattctggaagattatttttccaggaaacgtaagtaa
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