Cylindrospermopsis raciborskii: L3I90_11125
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Entry
L3I90_11125 CDS
T08337
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
L3I90_11125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
HHH_9
Tex_central_region
S1
YqgF
HHH_7
S1_RRP5
OB_PDCD11
OB_RRP5_4th
SpoVAE
baeRF_family10
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UJS03667
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Position
2552525..2554681
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AA seq
718 aa
AA seq
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MLNIPQLVALELGLKVNQVQNALDLLAEGATIPFIARYRKELTQEMTEVQLRDLSDRYTY
LTELEERKRAVLSAISEQGKLTDKLEEKISSCLQKTELEDLYLPYKPKRRTRATIAREKG
LESLAAFIKSLNVKNGTSISLDSVASKYVAQEKGVNTSEEALKGASDILAEEIADKAHLR
AYIREYVLETGVIISRIKEEYAEGTTKFEMYRNYQVKVKNVAPHNMLALSRGEAEKLLVF
DIGFDQDFLLAYLESQEIHTRTQNIRQFYQAMLKDAFNRLMKTSLINEVISEKKTYSDVE
SIKTFEANLRELLLSAPAGMKPTLAIDPGFRTGCKTAILDPTGKFLEYQAVFPHQGGEQR
QKAVQTVKKLIEKYEIQLIAIGNGTASRETDEFITEVLRDCHSKPIKVMVNESGASIYSA
SEVARKEFPDLDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLHE
TVESCVNYVGVDLNTASKELLTFVSGINPTVANNIITYRNQYGAFKNRQQLLKVPKLGPK
AFEQSAGFLKIRNGENPLDNTAVHPESYPLVEKIAGDLQVPLNQVTQIAERLKKTGIKKY
LTDAIGEPTLRDILRELEKPGRDPRAEFKYATFREGIKEIRDLTVGMELEGIITNVANFG
AFVDIGVHQDGLVHISQLADRFVEDPKTIVKVGQLVRVRVLEVNEKLKRISLSMRKPN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatattccccaattagtcgctcttgaattaggacttaaagtcaaccaggtacaa
aacgccttggatctcttagctgagggtgcaactattccctttattgcacgttatcgtaag
gaacttacccaagaaatgacggaagtacaactacgagatttatccgatagatatacatat
ttgacagaactagaagagagaaaacgggcagttttaagcgccatatcagaacaaggtaaa
ctcacggacaaactggaagagaaaatcagctcctgtttacagaaaacggaattagaggat
ttatacttaccctacaaaccaaagcgtcgcactcgtgctactattgctcgagaaaaaggt
ctggaatccttagcagcatttattaaatcattaaatgtaaaaaatggtacatccatttcc
ctggattcagtagcaagtaaatatgttgcccaggaaaaaggtgtgaataccagtgaagag
gcgttaaaaggcgctagtgatattttagcggaagaaatagctgacaaggctcatttaaga
gcctatatcagggaatatgtgttggaaacgggtgtgattatttcccgaatcaaagaggaa
tatgcggaagggacaactaaatttgaaatgtaccgtaactatcaggtaaaggtcaaaaat
gttgctccccataatatgttagctttaagtaggggagaagcggaaaaactcttagtcttt
gacattggttttgaccaagattttctacttgcttatttggaatctcaggaaattcacacc
cgaacacaaaatatcagacagttctaccaagctatgttaaaggatgcttttaaccgcttg
atgaaaacttcgttaattaatgaagtaattagtgaaaagaaaacttattctgatgttgaa
tctattaaaacctttgaagcaaatctgagggagttgttattgtctgcacccgcagggatg
aaacccaccttggccatagatccagggtttagaacgggttgtaagacagcgattttagat
ccgacgggtaaattcctagaatatcaagctgtttttcctcaccagggaggggaacagagg
caaaaagcggttcagacggtaaaaaagctcatagaaaagtatgagattcaactaatagca
attggcaatggcacagcatctcgcgaaacggatgaatttatcaccgaggttttaagagat
tgccactccaaaccaattaaggttatggtgaatgagtctggtgcatctatatattcagct
agtgaagtagctagaaaggaatttcctgatttagatataactgtcagaggtgcaattagt
attgggagaagattgcaagatcccctggctgaattagtaaaaattgaccccaaatccatt
ggggtgggacaatatcagcatgatgtggatcaaaaactcctgaaaaagaaattacatgaa
accgttgaaagttgtgtcaattatgtgggagtagatttgaatactgcttctaaagaactg
ttgacatttgtttctggaattaaccctacagttgctaataatattatcacctatcgcaat
caatatggggcatttaaaaatcgtcaacaactgttgaaagtgccaaaacttggtccgaaa
gcatttgaacagtcagcagggtttttaaaaattagaaatggggaaaatcccctggataat
actgcagttcatccggaaagttatcccctggtagaaaagatagcaggggatttacaagta
ccattaaatcaagttacccaaatagcagaacggttgaaaaaaactggcatcaaaaaatac
ctgactgatgccatcggagagcctactttgcgagatattctcagggaactggaaaaacca
ggaagagatcctcgtgcggaatttaaatatgccaccttccgggagggaattaaggaaatt
agggacttaaccgtgggtatggaattggaaggaattattactaatgtggctaattttggt
gcttttgttgatattggagttcatcaggatggattggttcacatatcccaattagcagat
agatttgtggaggatcccaaaaccatcgttaaggtgggacagttggtaagggtgagggtg
ctggaggtgaatgaaaagttaaaacgtattagtttatctatgagaaagcctaattaa
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