Cylindrospermopsis raciborskii: L3I90_13405
Help
Entry
L3I90_13405 CDS
T08337
Name
(GenBank) cysteine peptidase family C39 domain-containing protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk02010
ABC transporters
crk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L3I90_13405
03070 Bacterial secretion system
L3I90_13405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crk02000
]
L3I90_13405
02044 Secretion system [BR:
crk02044
]
L3I90_13405
Transporters [BR:
crk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
L3I90_13405
Secretion system [BR:
crk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
L3I90_13405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C70
Peptidase_C39_2
AAA_22
DUF3335
IstB_IS21
AAA_29
Guanylate_cyc_2
nSTAND3
AAA_30
RsgA_GTPase
NB-ARC
Mg_chelatase
DUF87
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
UJS04085
LinkDB
All DBs
Position
3045136..3047853
Genome browser
AA seq
905 aa
AA seq
DB search
MISALSQEHISAQISHILGKSLDQKDLENCLQKLEIIEPIVGKQFWQSETARPGIYLVLS
GRARILDSRNNLVSTLTLGACFGELTLFPEYDFANYVVRASVDLKIGYLPQEVINQLPSV
LEHLLLQAKNWDSFLKTHLETPISTTSQNIIQFPPERKPVKPAKPERKKSQKYFPTPTVT
VSNWWHKISKRYPYFEQQSASDCGAACLVMISRYWGKNFSINRLRELANVNRSGASMKSL
TSAAESIGFATRPVKASLDKFAQQPLPAIAHWEGKHYIVVYEISKKQVIVGDPAIGQRTL
TVEEFKAGWTGYALLLEPTKSFQESIETNSPFWQLFELVKPHFQILVEVLVASILIQIFG
LVTPLFTQLLLDRVIVQGSTITLNTVGFGLLIFGLFRVVINGLRQYLLDHTANKISVALL
VGFIKHTFLLPLSFFESRYVGDIVSRVQENQKIQRFLTGEALSIILDLLTVFIYVGLMFW
YSPPLALFVLAIVPPFVFLALFATPFLRRISREVFGALAKENSYLIQALSGISSIRSLAI
EQTVRWRWEELLHNLTKKNFAVQIISNKLQIISATIQSLATTGLLWFGAWLVIQNQLTIG
QLVAFNMLLGNIIQPFQRLIVLWNQLQEVIVSTERINDVLEAEVEEDLVIQPRQSLSKLR
GEICFENVTFRYHKDSDINILENINFHIKPEQTVAVVGRSGSGKTTLSKLILGLYPATDG
RILIDNQDVTSIALKSLRSQIGVVDQDTFLFGGTIRENISIAHPESTLEEIITVAQLAGA
DEFIKFMPMGYETQIGEGGGMLSGGQRQRLAIARALLGNPRLLILDEATSHLDAESERII
QKNLQKILKGRTSLIIAHRLSTVRHADLILVLDRGILVEQGTHEELIAKRGNYYYLNQQQ
LSVVS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagccctttctcaagaacatatatctgcccaaattagtcatattttaggtaaa
tccctggatcaaaaggatttagaaaattgtttgcaaaaattggaaatcattgaacctatt
gtggggaaacaattttggcaatctgaaaccgcccgcccaggaatttatttagtattatca
ggtcgagcgagaatattagatagtaggaacaatttagttagcactttaacattgggagca
tgctttggggagttgacattatttcccgaatatgattttgccaattatgttgttagagct
tccgtagatttaaagattggttatcttccccaggaagtaattaatcaattgcctagtgtt
ctagagcatctgctactccaagccaagaattgggatagctttttaaaaacacacctagaa
acaccaatctctaccacaagtcagaatatcattcaatttcctccagagaggaaaccagtt
aaaccagctaaaccagaacggaaaaaatcacaaaaatacttccctactcccacagttaca
gttagtaattggtggcataaaattagtaaacgatacccatattttgaacaacaaagtgct
tccgactgtggcgcagcttgtttagtaatgattagccgttattgggggaaaaatttcagt
attaatcgtctgcgagaactggctaatgttaaccgttctggtgcatcaatgaaaagttta
accagtgctgctgaaagtattggttttgccacccgtccagtaaaagccagtttagataaa
tttgctcagcaaccattacccgcgatcgcccattgggagggaaaacattatatagtagtc
tatgagattagcaaaaaacaggtaattgtaggagatcccgctattggacaacgaacttta
acggttgaggaatttaaagctgggtggactggttatgcactattattagaacctacaaaa
tctttccaagagagcatagaaactaacagcccattttggcagttatttgagttagtgaaa
cctcactttcagatacttgtagaagttttggtggcttcgattttaattcagatctttggt
ttggtaacacccctatttacccaacttttgttggatcgggttatagttcagggtagcaca
ataaccctaaatacagttgggtttggtttactaattttcggattatttagagtagtgatt
aatggacttagacaatatttattagaccacacagctaataaaattagcgtagcattattg
gtgggatttatcaaacatacatttttactacccttgtctttttttgagtctcgttatgtg
ggtgacattgtttctcgcgtacaagaaaaccaaaaaattcagcgattcctcacgggggaa
gccctatctattattctagatttactaacggtatttatttatgtaggcttgatgttttgg
tatagtccacctctagcattgtttgttttagcaattgtcccaccatttgtttttctagca
ttatttgccacaccttttttgagacgtattagtcgagaagtatttggagcattagccaaa
gagaatagctatttaattcaggctttaagtggcatttcttcaattcgttccttagctata
gaacaaactgtaagatggcgctgggaagaattactacataatttgaccaagaaaaacttt
gccgttcaaattattagtaataagttacaaataattagtgccaccattcaatctttagca
acaacaggcttactctggtttggcgcttggttagtaattcaaaatcagttgactattggt
caactagtagcctttaatatgttattaggcaacattatccagccttttcaaaggttaatc
gtgttgtggaatcaacttcaagaagttatagtttctaccgagcgcattaatgatgtatta
gaagcagaagtagaagaagatttagtcatccaacctcggcaaagtctatcaaaactaagg
ggagaaatttgctttgaaaatgtcacctttcgttatcacaaagacagcgatattaacatt
ttagaaaacatcaactttcacattaaacctgaacaaaccgtagcagtagtaggaagaagt
ggatctggtaagacaactctatccaaactaattttaggattatatcctgcgacagatggt
agaattttaatagacaatcaagatgtgacaagtattgctctcaaatccttacggtctcaa
ataggggttgtggaccaggacacatttttatttggtggtacaattagagaaaacatcagt
attgcccatccagaatccaccttagaagaaatcattaccgtggcacaattagcaggtgca
gatgaatttattaaatttatgcccatgggttacgaaactcaaattggtgagggaggaggt
atgttatcggggggacaaagacaacgattagctatagctagagcattattaggaaatccg
cgccttttaatattagatgaagccaccagtcatctagatgcagaatctgaaagaattatt
caaaaaaacttgcagaaaattctcaaaggacgcactagtttaataattgcccatcgtcta
tctaccgtacgtcatgctgacttaattttagtattagatcggggaattttagtcgagcaa
ggtactcacgaagaattgattgctaaacgtggaaattattactatcttaatcaacaacag
ttatccgtagttagttag
DBGET
integrated database retrieval system
