Cylindrospermopsis raciborskii: L3I90_13500
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Entry
L3I90_13500 CDS
T08337
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crk03016
]
L3I90_13500
Enzymes [BR:
crk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
L3I90_13500
Transfer RNA biogenesis [BR:
crk03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
L3I90_13500
Prokaryotic type
L3I90_13500
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Penicil_amidase
Motif
Other DBs
NCBI-ProteinID:
UJS04102
LinkDB
All DBs
Position
3070514..3071470
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AA seq
318 aa
AA seq
DB search
MQITFLGTSSGVPTRSRNVSSVALRLPQRAELWLFDCGEGTQHQILRSDLKISQLSRIFI
THLHGDHIFGLMGLLASCGLAGNVERVDIYGPAGLNEYLQGASRYSHTHFSYPIKVHTVQ
PGVIYEDEEFTVTCGMLHHRITAFGYRVMEKNRYGRFDVEQAKALQIPSGPIYGKLKRGE
TVKLEDGRIINGKELCGPTEIGRKFAYCTDTVYCDGAVKLAEDADVLIHEATFAHQDAEM
AFQRLHSTSTMAAQTAYVAGVNQLIMTHFSPRYTPGNDIELKDLLKEARAIFPNTIMAHD
FMVYDIPRRREKGSGDPD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatcacatttttagggacaagttctggtgtacccacaagatcacgtaatgtttcc
agtgtcgcgctgagactacctcaacgcgcagaactctggttatttgactgtggtgaaggt
acacaacatcaaattttgcgcagtgacctgaaaattagtcaactgtcacgcatttttatc
acccatctccatggtgaccacatttttggcttgatgggacttttagctagttgtggttta
gctggtaatgtggaacgggttgatatctatggacctgctggattaaatgagtacctgcaa
ggtgcttcacgttattcccacacccatttttcctatcctatcaaagtccatactgttcaa
cctggtgtgatttacgaagatgaggaatttactgtcacttgtggaatgctccatcaccgc
attactgcttttggttatcgtgtaatggaaaaaaacagatatgggcggtttgatgtggaa
caagctaaagccctacaaataccttctggaccaatttatggaaaacttaaacggggggaa
actgtcaaattggaagatggtcgaatcattaatggtaaggaattatgtggtccaacggaa
attggacgtaagtttgcctattgtacagatactgtttattgtgatggtgcggttaaatta
gctgaggatgcggatgtattaattcatgaagctacttttgcccatcaagatgcggaaatg
gctttccaaagactacattctaccagtacaatggcagcacaaacagcttatgtggctgga
gtaaatcaactgattatgacccattttagtcccagatatactccgggaaatgacattgag
ttgaaagatttacttaaagaagctcgtgcaatttttcctaataccatcatggctcatgat
tttatggtttatgacatacccagaagaagggaaaagggatctggggatcctgattaa
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