Cylindrospermopsis raciborskii: L3I90_14355
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Entry
L3I90_14355 CDS
T08337
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
crk
Cylindrospermopsis raciborskii
Pathway
crk03030
DNA replication
crk03430
Mismatch repair
crk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3I90_14355
03430 Mismatch repair
L3I90_14355
03440 Homologous recombination
L3I90_14355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crk03032
]
L3I90_14355
03400 DNA repair and recombination proteins [BR:
crk03400
]
L3I90_14355
Enzymes [BR:
crk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3I90_14355
DNA replication proteins [BR:
crk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3I90_14355
DNA repair and recombination proteins [BR:
crk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3I90_14355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
WDR55
Intein_splicing
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
UJS04254
LinkDB
All DBs
Position
3261957..3263303
Genome browser
AA seq
448 aa
AA seq
DB search
MVKIVSRRYLGKADVYDIGVAKDHNFIIKNGLVASNCFNKSHSTAYGYVTYQTAYLKANY
PLEYMAALLTANSGDTDKVQKYLNNCNNMGIEIDPPDINRSGLDFTPADQKILFGFSAVR
NVGQNAIAGILDARQQGGEFTSLGDFCDRIDLRVVNRRTLESLIQCGAFDKIESNRHQLV
KDLELVYEWAQSRAKDRAIGQGNLFDFMGTGISNVSTSSKNGFKSIPKADPVSDYPPQEK
LRMEKELLGFYVSAHPLKNIKQSSSLLAPINLVDLGEQKDKNLVCVVVMLNHVKKVMTKK
GEQMAILQIEDLTTTSEAVVFPKTYERINGILEIDARLIVWGKVDKRDEQTQLLVEDAEQ
VEKIQMVVVELNPHEASSIDTQHHLRSILKEQSGDKDKAKVPVIGIVQAGSYRQVVRFGK
QYWVQDASLTVHSLRNAQFSAHGKQLSD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatagtttctcgccgatatttaggaaaagcggatgtttatgacattggagtt
gccaaagaccacaattttatcatcaaaaatggcttggttgcttccaactgtttcaataaa
tctcactctaccgcctatggttatgtcacttaccaaacagcatacttaaaagctaattat
cccttggaatatatggcagcactgttaacagctaacagtggggatacggacaaagttcag
aaatatctcaacaattgtaataacatggggattgaaattgatccaccagatattaatcgt
tctgggttagattttacaccagcagatcagaagatattatttggattttccgcagtgcgt
aatgtgggacaaaatgcgatcgctggtatcttagatgctcgtcaacaaggaggagaattt
acatctctaggtgacttttgcgatcgcattgatttacgggttgtcaatcgtcgcacccta
gagtcattaattcaatgtggagcatttgataaaatagagtcgaaccgccatcaattagtt
aaagatttagaattagtatatgaatgggcccaatcccgtgctaaagatagagctattggt
caaggaaacctatttgacttcatgggtactggcattagtaacgtgtccacaagtagtaaa
aatggatttaagtccatacctaaagccgacccagtgtcagactatcccccccaggaaaaa
ctgcgaatggaaaaagaattattaggtttttatgtatcagcccatcctttaaaaaatatt
aaacaatcttcatctttattagcgcccattaatcttgtcgatttaggagagcaaaaggat
aaaaacctagtttgtgtagtggtgatgctgaaccacgtcaaaaaagtgatgaccaaaaaa
ggggagcaaatggcaattttgcaaattgaggatttaaccacaacctcagaagcagttgtg
tttcccaaaacctatgagcggattaatggaatactagaaattgatgccagattaattgtg
tgggggaaggtagataaacgggatgaacagacccaattgctggtggaagatgcagagcag
gtagagaaaattcagatggtagtagtggaattaaatccccacgaagccagtagtattgat
actcaacatcatttacgctctattttaaaagaacaatcgggggataaagataaagccaaa
gttcctgtgattggaattgttcaagcgggaagttaccgtcaagtggttaggtttggtaag
cagtattgggtacaagatgcaagtcttaccgtccactccctcagaaatgctcagtttagt
gctcatggtaaacagttaagtgattag
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