Cylindrospermopsis raciborskii: L3I90_14885
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Entry
L3I90_14885 CDS
T08337
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crk03021
]
L3I90_14885
Transcription machinery [BR:
crk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3I90_14885
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_71
ZapD
Motif
Other DBs
NCBI-ProteinID:
UJS06396
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Position
complement(3358038..3358994)
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AA seq
318 aa
AA seq
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MKTAQTPTDIVRTYLREIGKVPLLTHEQEIYYGKQVQKSTALYETKDNLAQELNRQPSLE
EWAKAAQLDPQELNRLLGQGEIAKRKMVEANLRLVVSVAKKYIKRNVDLLDLIQEGSIGM
QRGVEKFDPSKGYRFSTYAYWWIRQAITRAIAEKARTIRLPIHITEKLNKIKKAQRYLSQ
TLGRSPSIAELAQELEITPKQVRDCLEKARLPLSLDLRLGDNYDTELGEMLEDPGASPED
YVIQSSLSSELDRMMTHLTPQQREVIKLRFGLVDGQSMTLARIGEVLNISRERVRQIERE
ALTRLRRCKTSMSEYLVS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgctcaaacacccacggacatagtgcggacttacctgcgggagattggcaaa
gtaccacttttaacccatgaacaggagatttattatggtaaacaggtgcaaaaatccaca
gcattgtatgagacaaaagataatctagctcaagagttaaaccgtcagccaagtttagaa
gagtgggcaaaagcagcgcagttagatccacaagaattaaatcggttgctgggtcagggg
gaaattgctaaacgtaagatggtagaagccaatttacgtctggtagtatctgtagccaaa
aaatatattaagcgtaatgtagacctacttgatttaattcaggagggtagtatagggatg
cagcggggcgtggagaagtttgaccccagtaaaggctataggttttccacctatgcttat
tggtggatacgtcaggcaattactcgtgctattgcagaaaaagccaggactattagactg
cccatacacattactgaaaaactcaacaaaatcaaaaaagcccaaaggtatttatcacaa
accttgggaaggtcacccagtatagctgaacttgctcaagagctggaaataacacctaaa
caagtgagggactgtttagaaaaagctcgcctacccttatccctggacttacgtttaggg
gataattacgacactgaactgggagaaatgctagaagacccgggtgcgtcaccggaagat
tatgtgattcaatcttccctatcttccgaattagatcggatgatgacccatcttactccc
cagcaaagggaggtaattaaactgcgttttggtttggtagacggtcagtctatgaccttg
gccagaattggagaggtgttgaatattagtcgagaaagggtgcgacaaattgaaagagaa
gccttaacaagactgcgtagatgtaaaactagcatgagtgaatatcttgttagttaa
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