Cylindrospermopsis raciborskii: L3I90_15885
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Entry
L3I90_15885 CDS
T08337
Name
(GenBank) ribonuclease H-like domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
crk
Cylindrospermopsis raciborskii
Brite
KEGG Orthology (KO) [BR:
crk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crk03016
]
L3I90_15885
Enzymes [BR:
crk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L3I90_15885
Transfer RNA biogenesis [BR:
crk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L3I90_15885
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UJS04527
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All DBs
Position
3603551..3604180
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AA seq
209 aa
AA seq
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MKLDDFQVVDGDLDYPTLSEYLRSDALAVDTETMGLLPQRDRLCLVQLCNPEGKVTAVRI
AKGQTHAPNLQQLLESTHVVKVFHFARFDLATLRHNLKIHVQPVFCTKIASKLARTYTNR
HGLKELVQELEQVELDKSSQSSDWGNPLGLSDAQLSYAANDVRYLLSLKQKLSQMLQREE
RWQLAQECFSFLPTLVSLDLLQFKELFEH
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagatgattttcaggtagttgatggggatctagactaccctaccctctcggaa
tatttaaggtcagatgctttagctgtggatacagaaactatgggtttgctaccacagcga
gatcgtctctgtctggttcaactatgtaaccctgaaggtaaggtgactgctgtccgcatt
gctaagggacaaacccacgcccctaacctacaacaacttctagaatcaacccatgttgtc
aaggtttttcactttgccaggtttgatctggccactttgcgtcacaacctgaaaattcat
gtccaacctgttttttgtacgaaaattgccagtaagctggctcgtacttacacaaaccgt
catggactgaaagagcttgtacaagagctagagcaagtagaattggataaaagttctcag
agttcggactgggggaatccgctgggtttatctgatgctcaactaagctatgctgctaat
gatgtacgctatctgcttagtttaaagcaaaaactttctcaaatgttgcaaagagaagaa
cgctggcaattggcacaggagtgttttagttttttacctactttagtttctttggatctt
ttgcagtttaaagaactatttgaacactag
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